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Revision as of 15:18, 22 October 2010
, 15:18, 22 October 2010→Inputs
; lsr : phred-scaled likelihood of observed bases given heterozygous genotype
; lsr : phred-scaled likelihood of observed bases given heterozygous genotype
; lss : phred-scaled likelihood of observed bases given non-reference genotype
; lss : phred-scaled likelihood of observed bases given non-reference genotype
== Calculation ==
:<math>
:<math>
AB = (0.05 + {\sum_i P_i(het) * nref)\over(0.10 + \sum_i P_i(het)*depth)}
AB = (0.05 + {\sum_i P_i(het) * nref)\over(0.10 + \sum_i P_i(het)*depth)}
</math>
</math>
== Points ==
Three points for correctly deciphering why this formula works.
