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69 bytes added
, 17:19, 9 March 2011
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| 6. Visualize alignment to reference genome | | 6. Visualize alignment to reference genome |
| + | ${BIN}/samtools-hybrid index ${OUT}/NA12878.exon.sample.deduped.bam |
| ${BIN}/samtools-hybrid tview ${OUT}/NA12878.exon.sample.deduped.bam ${REF}/human_g1k_v37_chr20.fa | | ${BIN}/samtools-hybrid tview ${OUT}/NA12878.exon.sample.deduped.bam ${REF}/human_g1k_v37_chr20.fa |
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| * Type 'g', and 20:19989392 | | * Type 'g', and 20:19989392 |
| * TYPE 'g', and 20:20032998 | | * TYPE 'g', and 20:20032998 |