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Created page with ''''glfSingle''' is a GLF-based variant caller for next-generation sequencing data. It takes a GLF format genotype likelihood file as input and generates a VCF-format …'
'''glfSingle''' is a [[GLF]]-based variant caller for next-generation sequencing data. It takes a [[GLF]] format genotype likelihood file as input and generates a [[VCF]]-format set of variant calls as output.

== Basic Usage Example ==

Here is an example of how <code>glfSingle</code> works:

glfSingle -g NA19240.chrom20.SLX.glf -b NA19240.chrom20.SLX.vcf > NA19240.chrom20.SLX.log

== Command Line Options ==

== Model for Variant Calling ==

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