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[[Category:BamUtil|dumpRefInfo]]
[[Category:BAM Software]]
[[Category:Software]]
= Overview of the <code>dumpRefInfo</code> function of <code>bamUtil</code> =
The <code>dumpRefInfo</code> option on the [[bamUtil]] executable prints the SAM/BAM file's reference information.
= Parameters =
<pre>
Required Parameters:
--in : the SAM/BAM file to be read
Optional Parameters:
--noeof : do not expect an EOF block on a bam file.
--printRecordRefs : print the reference information for the records in the file (grouped by reference).
--params : print the parameter settings
</pre>
= Usage =
./bam dumpRefInfo --in <inputFilename> [--noeof] [--printRecordRefs] [--params]
= Return Value =
* 0: the file was processed successfully.
* non-0: the file was not processed successfully.
[[Category:BAM Software]]
[[Category:Software]]
= Overview of the <code>dumpRefInfo</code> function of <code>bamUtil</code> =
The <code>dumpRefInfo</code> option on the [[bamUtil]] executable prints the SAM/BAM file's reference information.
= Parameters =
<pre>
Required Parameters:
--in : the SAM/BAM file to be read
Optional Parameters:
--noeof : do not expect an EOF block on a bam file.
--printRecordRefs : print the reference information for the records in the file (grouped by reference).
--params : print the parameter settings
</pre>
= Usage =
./bam dumpRefInfo --in <inputFilename> [--noeof] [--printRecordRefs] [--params]
= Return Value =
* 0: the file was processed successfully.
* non-0: the file was not processed successfully.
