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==== General Tools ====
==== General Tools ====
*[[QPLOT]] - Calculate & plot summary statistics
*[[QPLOT]] - Calculate & plot summary statistics
*[[BamUtil: validator|Validate]] – Check file format & print statistics
*[[BamUtil: validate|Validate]] – Check file format & print statistics
*[[BamUtil: convert|Convert]] – Convert between SAM & BAM
*[[BamUtil: convert|Convert]] – Convert between SAM & BAM
*[[BamUtil: writeRegion|WriteRegion]] – Write only reads in the specified region
*[[BamUtil: writeRegion|WriteRegion]] – Write only reads in the specified region
