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Arf (view source)

Revision as of 11:40, 18 January 2012

No change in size ,  11:40, 18 January 2012
→‎Basic Usage Example
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   #HWEAF - Allele frequency estimates of alternate alleles under the assumption of HWE equilibrium (EM)
 
   #HWEAF - Allele frequency estimates of alternate alleles under the assumption of HWE equilibrium (EM)
 
   #GF - Genotype frequency estimates (EM)
 
   #GF - Genotype frequency estimates (EM)
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   arf -s freq 1000g.vcf
+
   arf -a freq 1000g.vcf
    
   #conducts HWE LRT test from genotype likelihoods (multiallelic)
 
   #conducts HWE LRT test from genotype likelihoods (multiallelic)
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