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, 03:12, 25 October 2012
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| ** If you do have different orders or even different numbers of chromosomes in the BAM files, you can create GLF files for individual chromosomes and run polymutt on matched chromosomes. | | ** If you do have different orders or even different numbers of chromosomes in the BAM files, you can create GLF files for individual chromosomes and run polymutt on matched chromosomes. |
| * For ''de novo'' mutations, the current version can only take GLF files and only detect single nucleotide mutations. It does not call ''de novo'' mutations on X, Y and MT chromosomes, and please ignore records in these non-autosomes. Indels are not handled either. | | * For ''de novo'' mutations, the current version can only take GLF files and only detect single nucleotide mutations. It does not call ''de novo'' mutations on X, Y and MT chromosomes, and please ignore records in these non-autosomes. Indels are not handled either. |
− | * Some of the features will be implemented in future versions if needed. | + | * Some of the features will be implemented in future versions. |
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| == Usage == | | == Usage == |