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Jump to navigationJump to searchGotCloud: Alignment Pipeline (view source)
Revision as of 10:08, 29 October 2012
, 10:08, 29 October 2012Created page with 'Login as a normal user (not as root) and do: # Test the aligner (fast, about 3 minutes) /usr/local/biopipe/bin/gen_biopipeline.pl --test ~/testalign rm -rf ~/testalign …'
Login as a normal user (not as root) and do:
# Test the aligner (fast, about 3 minutes)
/usr/local/biopipe/bin/gen_biopipeline.pl --test ~/testalign
rm -rf ~/testalign # If no error
# Test umake (longer, about 15 minutes)
/usr/local/biopipe/bin/umake.pl --test ~/testumake
rm -rf ~/testumake # If no error
# Test the aligner (fast, about 3 minutes)
/usr/local/biopipe/bin/gen_biopipeline.pl --test ~/testalign
rm -rf ~/testalign # If no error
# Test umake (longer, about 15 minutes)
/usr/local/biopipe/bin/umake.pl --test ~/testumake
rm -rf ~/testumake # If no error
