From Genome Analysis Wiki
Jump to navigationJump to search
9 bytes added
, 16:24, 18 November 2012
Line 127: |
Line 127: |
| * To let Rare-Metal-Worker handle unrelated individuals, we just have to code the individuals as unrelated in PED file, or each individual belongs to a unique family. Then Rare-Metal-Worker will take care of the rest. | | * To let Rare-Metal-Worker handle unrelated individuals, we just have to code the individuals as unrelated in PED file, or each individual belongs to a unique family. Then Rare-Metal-Worker will take care of the rest. |
| * However, when --kinGenotype is also used, Rare-Metal-Worker will consider them as related and generate kinship matrix from genotypes. | | * However, when --kinGenotype is also used, Rare-Metal-Worker will consider them as related and generate kinship matrix from genotypes. |
− | * An example is shown as following (header is for illustration purpose, not in real PED file): | + | * An example is shown as following (header is included for illustration purpose, not in real PED file): |
| | | |
| famid pid fid mid sex age trait | | famid pid fid mid sex age trait |