From Genome Analysis Wiki
Jump to navigationJump to search
49 bytes removed
, 19:57, 18 November 2012
Line 47: |
Line 47: |
| * An example command line to use when you have genotype info saved in VCF file and you want to adjust covariates first and then inverse normalize residuals is as following: | | * An example command line to use when you have genotype info saved in VCF file and you want to adjust covariates first and then inverse normalize residuals is as following: |
| ./Rare-Metal-Worker --ped your.pheno.ped --dat your.pheno.dat --vcf your.geno.vcf.gz --makeResiduals --useCovariates --inverseNormal --prefix your.study | | ./Rare-Metal-Worker --ped your.pheno.ped --dat your.pheno.dat --vcf your.geno.vcf.gz --makeResiduals --useCovariates --inverseNormal --prefix your.study |
− | * For more examples, please go here: http://genome.sph.umich.edu/w/index.php?title=Rare-Metal-Worker&action=edit§ion=21 | + | * For more examples, please go to the Examples in Section 6 from contents. |
| | | |
| == Software Specifications == | | == Software Specifications == |