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If there are installation problems please let Scott know.
If there are installation problems please let Scott know.
'''NOTE:''' It is essential that each trait is corrected for covariates, the residuals are inverse normalized, and then association testing is conducted, in that order. The Rare-Metal-Worker software has this functionality when you jointly specify
'''NOTE:''' It is essential that, after each trait has been log-transformed (except for CPD) and corrected for covariates, the residuals are inverse normalized, and then association testing is conducted, in that order. The Rare-Metal-Worker software has this functionality when you jointly specify
--makeResiduals --inverseNormalize
--makeResiduals --inverseNormalize
Alternatively, you could correct for covariates using your software of choice (R, SAS, etc.) prior to using Rare-Metal-Worker, but still specify --makeResiduals and --inverseNormalize. You still want to specify --makeResiduals to correct for the intercept.
Alternatively, you could correct for covariates prior to using Rare-Metal-Worker, but still specify --makeResiduals and --inverseNormalize. You still specify --makeResiduals in order to correct for the intercept.
==== Submitting Results for Meta-Analysis ====
==== Submitting Results for Meta-Analysis ====
