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| To install an official release, unpack the downloaded file (tar xvf), cd into the libStatGen directory and type <code>make all</code>. | | To install an official release, unpack the downloaded file (tar xvf), cd into the libStatGen directory and type <code>make all</code>. |
| | | |
− | [[Media:LibStatGen.1.0.8.tgz|LibStatGen.1.0.8.tgz]] - Released 1/29/2013 | + | [[Media:LibStatGen.1.0.9.tgz|LibStatGen.1.0.9.tgz]] - Released 7/7/2013 |
| | | |
− | '''LibStatGen.1.0.8 Release Notes''' | + | '''LibStatGen.1.0.9 Release Notes''' |
| * Contains classes for general processiong (string, reference file, parameters), bam, glf, fastq, and vcf | | * Contains classes for general processiong (string, reference file, parameters), bam, glf, fastq, and vcf |
| ** Updates: | | ** Updates: |
− | *** Added VCF file handling (merged the vcf branch to master) | + | *** Update Makefile processing to check for a Makefile in the test directory before recursively calling make in there |
− | *** Add support for reading Tabix files | + | *** Replace CFLAGS wtih COMPFLAGS |
− | *** Add ReusableVector class that holds vectors that will remove only the last or be reset & reused without clearing memory. | + | *** Update the Windows WIN32 if statements |
| + | **General Updates: |
| + | *** Add boundary check to StringBasics memory |
| + | *** Added support for new CIGAR characters (X & =) |
| + | *** Update bug in PedigreeLoader to specify WHITESPACE |
| + | *** add accessors for getting tabix information |
| + | ** Vcf Updates: |
| + | *** add ability to drop trailing missing Genotype fields |
| + | *** check that the tabix index is for VCF file type |
| + | *** Fix broken dependency |
| + | ** Bam Updates: |
| + | *** SamHeaderRecord: add accessor to get the value for the key |
| + | *** update some classes to have virtual destructors |
| + | |
| | | |
| ''' Older Releases''' | | ''' Older Releases''' |
| + | *[[Media:LibStatGen.1.0.8.tgz|LibStatGen.1.0.8.tgz]] - Released 1/29/2013 |
| + | ** Contains classes for general processiong (string, reference file, parameters), bam, glf, fastq, and vcf |
| + | *** Updates: |
| + | **** Added VCF file handling (merged the vcf branch to master) |
| + | **** Add support for reading Tabix files |
| + | **** Add ReusableVector class that holds vectors that will remove only the last or be reset & reused without clearing memory. |
| + | |
| *[[Media:LibStatGen.1.0.7.tgz|LibStatGen.1.0.7.tgz]] - Released 1/29/2013 | | *[[Media:LibStatGen.1.0.7.tgz|LibStatGen.1.0.7.tgz]] - Released 1/29/2013 |
| ** Contains classes for general processiong (string, reference file, parameters), bam, glf, and fastq | | ** Contains classes for general processiong (string, reference file, parameters), bam, glf, and fastq |