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, 21:17, 7 August 2013
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| * According to the example above, PCSK9 had a p-value of 7.54587e-11 from the gene-based burden test, where three variants from this gene were included. Another hit from this meta analysis is APOE, where only one variant was included in the burden test. | | * According to the example above, PCSK9 had a p-value of 7.54587e-11 from the gene-based burden test, where three variants from this gene were included. Another hit from this meta analysis is APOE, where only one variant was included in the burden test. |
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− | ==== Plots ==== | + | ==== QQ PLOTS and MANHATTAN PLOTS ==== |
| '''rareMETAL''' generates QQ plots and manhattan plots from single variant and gene-level meta-analysis by default. Example QQ plots and manhattan plots are: | | '''rareMETAL''' generates QQ plots and manhattan plots from single variant and gene-level meta-analysis by default. Example QQ plots and manhattan plots are: |
| {| border="0" | | {| border="0" |