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LocusZoom Standalone (view source)

Revision as of 18:13, 9 March 2014

No change in size ,  18:13, 9 March 2014
→‎Plotting LD with additional reference SNPs
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locuszoom --metal <DIAGRAM T2D results> --refsnp "rs231362" --add-refsnps "rs163184"
 
locuszoom --metal <DIAGRAM T2D results> --refsnp "rs231362" --add-refsnps "rs163184"
 
</syntaxhighlight>
 
</syntaxhighlight>
 +
    
Will generate the following plot:  
 
Will generate the following plot:  
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| Bins for LD
 
| Bins for LD
 
|}
 
|}
−
      
=== GWAS catalog variants ===
 
=== GWAS catalog variants ===
Welchr
239

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Retrieved from "http://genome.sph.umich.edu/wiki/Special:MobileDiff/9561"

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