SeqShop: December 2014: Difference between revisions

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{| class="wikitable" cellpadding=5
{| class="wikitable" cellpadding=5
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! style="background:#ABE" | Monday Lecture !! style="background:#ABE" | Practical
! style="background:#ABE" | Monday !! style="background:#ABE" | Lecture !! style="background:#ABE" | Practical
|-
|-
|
| [[Media:Sequencing symposium 2014.pptx|Design of Human Genetic Studies]]
| [[Media:Sequencing symposium 2014.pptx|Design of Human Genetic Studies]]
| [[Media:Dec2014 SeqShop - Linux.pdf|SeqShop: Practical Intro]]
| [[Media:Dec2014 SeqShop - Linux.pdf|SeqShop: Practical Intro]]
|-
|-
|
| [[Media:TBD|Sequence Mapping and Assembly]]
| [[Media:TBD|Sequence Mapping and Assembly]]
| [[SeqShop: Sequence Mapping and Assembly Practical, December 2014|SeqShop: Sequence Mapping and Assembly Practical]]
| [[SeqShop: Sequence Mapping and Assembly Practical, December 2014|SeqShop: Sequence Mapping and Assembly Practical]]
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|''[[SeqShop: Aligning Your Own Genome]]''
|''[[SeqShop: Aligning Your Own Genome]]''
|-
|-
! style="background:#ABE" | Tuesday Lecture !! style="background:#ABE" | Practical
! style="background:#ABE" | Tuesday !! style="background:#ABE" | Lecture !! style="background:#ABE" | Practical
|-
|-
|
| [[Media:TBD|Variant Calling and Filtering for SNPs]]
| [[Media:TBD|Variant Calling and Filtering for SNPs]]
| [[SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014|SeqShop: Variant Calling and Filtering for SNPs Practical]]
| [[SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014|SeqShop: Variant Calling and Filtering for SNPs Practical]]
|-
|-
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| [[Media:TBD|Variant Calling and Filtering for INDELs]]
| [[Media:TBD|Variant Calling and Filtering for INDELs]]
| [[SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014|SeqShop: Variant Calling and Filtering for INDELs Practical]]
| [[SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014|SeqShop: Variant Calling and Filtering for INDELs Practical]]
|-
|-
! style="background:#ABE" | Wednesday Lecture !! style="background:#ABE" | Practical
! style="background:#ABE" | Wednesday !! style="background:#ABE" | Lecture !! style="background:#ABE" | Practical
|-
|-
|
| [[Media:TBD|Analysis of Structural Variation - Part 1]]
| [[Media:TBD|Analysis of Structural Variation - Part 1]]
[[Media:TBD|Analysis of Structural Variation - Part 2]]
[[Media:TBD|Analysis of Structural Variation - Part 2]]
| [[SeqShop: Analysis of Structural Variation Practical, December 2014|SeqShop: Analysis of Structural Variation Practical]]
| [[SeqShop: Analysis of Structural Variation Practical, December 2014|SeqShop: Analysis of Structural Variation Practical]]
|-
|-
! style="background:#ABE" | Thursday Lecture !! style="background:#ABE" | Practical
! style="background:#ABE" | Thursday !! style="background:#ABE" | Lecture !! style="background:#ABE" | Practical
|-
|-
|
| [[Media:TBD|Estimates of Genetic Ancestry]]
| [[Media:TBD|Estimates of Genetic Ancestry]]
| [[SeqShop: Estimates of Genetic Ancestry Practical, December 2014| SeqShop: Estimates of Genetic Ancestry Practical]]
| [[SeqShop: Estimates of Genetic Ancestry Practical, December 2014| SeqShop: Estimates of Genetic Ancestry Practical]]
|-
|-
|
| [[Media:TBD|Genetic Association Analysis]]
| [[Media:TBD|Genetic Association Analysis]]
| [[SeqShop: Genetic Association Analysis Practical, December 2014|SeqShop: Genetic Association Analysis Practical]]
| [[SeqShop: Genetic Association Analysis Practical, December 2014|SeqShop: Genetic Association Analysis Practical]]
|-
|-
! style="background:#ABE" | Friday Lecture !! style="background:#ABE" | Practical
! style="background:#ABE" | Friday !! style="background:#ABE" | Lecture !! style="background:#ABE" | Practical
|-
|-
|
| [[Media:TBD|Example of a Whole Genome Association Study]]
| [[Media:TBD|Example of a Whole Genome Association Study]]
| ''[[SeqShop: Friday - Practicing what we learned, December 2014| SeqShop: Friday - Practicing what we learned]]''
| ''[[SeqShop: Friday - Practicing what we learned, December 2014| SeqShop: Friday - Practicing what we learned]]''
|}
|}

Revision as of 05:33, 8 December 2014

Sequence Analysis Workshop December 8-12, 2014: http://seqshop.sph.umich.edu/

Workshop Schedule: SeqShopScheduleDec2014.pdf

Monday Lecture Practical
Design of Human Genetic Studies SeqShop: Practical Intro
Sequence Mapping and Assembly SeqShop: Sequence Mapping and Assembly Practical
iobio
SeqShop: Aligning Your Own Genome
Tuesday Lecture Practical
Variant Calling and Filtering for SNPs SeqShop: Variant Calling and Filtering for SNPs Practical
Variant Calling and Filtering for INDELs SeqShop: Variant Calling and Filtering for INDELs Practical
Wednesday Lecture Practical
Analysis of Structural Variation - Part 1

Analysis of Structural Variation - Part 2

SeqShop: Analysis of Structural Variation Practical
Thursday Lecture Practical
Estimates of Genetic Ancestry SeqShop: Estimates of Genetic Ancestry Practical
Genetic Association Analysis SeqShop: Genetic Association Analysis Practical
Friday Lecture Practical
Example of a Whole Genome Association Study SeqShop: Friday - Practicing what we learned
Retrieved from "http://genome.sph.umich.edu/w/index.php?title=SeqShop:_December_2014&oldid=12198"