User contributions
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Jump to navigationJump to search- 14:57, 11 February 2015 diff hist +4 GotCloud: Variant Calling Options →Chromosome X Calling current
- 18:47, 10 February 2015 diff hist +2,006 GotCloud: GenomeSTRiP Pipeline →Configuration File current
- 18:18, 10 February 2015 diff hist +1 GotCloud: GenomeSTRiP Pipeline →Analysis Region Options
- 17:13, 10 February 2015 diff hist +3,346 GotCloud: GenomeSTRiP Pipeline →Running GotCloud/GenomeSTRiP
- 16:46, 10 February 2015 diff hist +311 GotCloud: GenomeSTRiP Pipeline →BAM List File
- 16:46, 10 February 2015 diff hist +66 GotCloud: Variant Calling Pipeline →BAM List File
- 16:45, 10 February 2015 diff hist +299 GotCloud: Variant Calling Pipeline →BAM List File
- 16:42, 10 February 2015 diff hist +1,928 GotCloud: GenomeSTRiP Pipeline →Input Data
- 15:03, 10 February 2015 diff hist +700 GotCloud: GenomeSTRiP Pipeline →Running GotCloud/GenomeSTRiP
- 14:18, 10 February 2015 diff hist -28 GotCloud: GenomeSTRiP Pipeline →Running GotCloud/GenomeSTRiP
- 13:03, 10 February 2015 diff hist +41 GotCloud: GenomeSTRiP Pipeline →Genotyping Pipeline
- 13:02, 10 February 2015 diff hist +50 GotCloud: GenomeSTRiP Pipeline →Discovery Pipeline
- 13:02, 10 February 2015 diff hist +886 GotCloud: GenomeSTRiP Pipeline →Running GotCloud/GenomeSTRiP
- 12:49, 10 February 2015 diff hist +1 GotCloud: GenomeSTRiP Pipeline →Metadata Pipeline
- 18:36, 9 February 2015 diff hist +1,592 GotCloud: GenomeSTRiP Pipeline
- 18:15, 9 February 2015 diff hist +3,007 N GotCloud: GenomeSTRiP Pipeline Created page with "Back to parent: GotCloud == GenomeSTRiP == GenomeSTRiP was developed at the Broad Institute and at the McCarroll Lab at the Harvard Medical School Department of Genetics:..."
- 12:44, 6 February 2015 diff hist -1 Screen Commands current
- 12:44, 6 February 2015 diff hist +215 Screen Commands
- 10:39, 19 January 2015 diff hist +911 GotCloud: FAQs →Variant Calling Pipeline FAQs
- 14:42, 13 January 2015 diff hist +180 GotCloud: Genetic Reference and Resource Files →Downloadable Reference and Resource Files
- 11:39, 7 January 2015 diff hist +189 GotCloud: Alignment Pipeline →Configuration File
- 14:40, 5 January 2015 diff hist -4 GotCloud: Genetic Reference and Resource Files →Genetic Reference and Resource Files
- 12:17, 18 December 2014 diff hist +313 SeqShop: December 2014 current
- 18:08, 17 December 2014 diff hist +22 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Setup when running on your own outside of the SeqShop Workshop
- 18:02, 17 December 2014 diff hist +11 SeqShop: Genetic Association Analysis Practical, December 2014 →Run Groupwise Test
- 18:02, 17 December 2014 diff hist -3 SeqShop: Genetic Association Analysis Practical, December 2014 →Run Groupwise Test
- 17:57, 17 December 2014 diff hist -1 SeqShop: Genetic Association Analysis Practical, December 2014 →Run Groupwise Test
- 17:56, 17 December 2014 diff hist 0 File:Single.epacts.qq.png Mktrost uploaded a new version of "File:Single.epacts.qq.png" current
- 17:53, 17 December 2014 diff hist +2 SeqShop: Genetic Association Analysis Practical, December 2014 →Single Variant Association Analysis
- 17:43, 17 December 2014 diff hist 0 SeqShop: Genetic Association Analysis Practical, December 2014
- 17:43, 17 December 2014 diff hist -64 SeqShop: Genetic Association Analysis Practical, December 2014 →Return to Ancestry on your own genome
- 17:42, 17 December 2014 diff hist +53 SeqShop: Genetic Association Analysis Practical, December 2014 →Introduction
- 17:26, 17 December 2014 diff hist +18 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Setup when running on your own outside of the SeqShop Workshop
- 17:25, 17 December 2014 diff hist +66 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Setup when running on your own outside of the SeqShop Workshop
- 17:23, 17 December 2014 diff hist -2 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Setup when running on your own outside of the SeqShop Workshop
- 17:21, 17 December 2014 diff hist +64 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Setup when running on your own outside of the SeqShop Workshop
- 17:14, 17 December 2014 diff hist -64 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Setup when running on your own outside of the SeqShop Workshop
- 17:13, 17 December 2014 diff hist -13 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Setup when running on your own outside of the SeqShop Workshop
- 17:12, 17 December 2014 diff hist +13 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Setup in person at the SeqShop Workshop
- 17:10, 17 December 2014 diff hist +53 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Introduction
- 17:10, 17 December 2014 diff hist -44 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Restarting SNP Call on your own Genome
- 17:09, 17 December 2014 diff hist +99 SeqShop: Analysis of Structural Variation Practical, December 2014 →What does a real SV look like? current
- 17:09, 17 December 2014 diff hist +99 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Normalization current
- 17:09, 17 December 2014 diff hist +99 SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014 →What is GotCloud snpcall doing?
- 17:09, 17 December 2014 diff hist +98 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Logging Off
- 17:08, 17 December 2014 diff hist -139 SeqShop: Analysis of Structural Variation Practical, December 2014 →Starting SNP Call on your own Genome
- 16:35, 17 December 2014 diff hist 0 SeqShop: Analysis of Structural Variation Practical, December 2014 →How many variants are filtered out?
- 16:17, 17 December 2014 diff hist +13 SeqShop: Analysis of Structural Variation Practical, December 2014
- 16:15, 17 December 2014 diff hist +14 SeqShop: Analysis of Structural Variation Practical, December 2014 →Introduction
- 16:09, 17 December 2014 diff hist 0 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Comparison with other data sets
- 16:00, 17 December 2014 diff hist 0 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Comparison with other data sets
- 15:59, 17 December 2014 diff hist 0 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Comparison with other data sets
- 15:48, 17 December 2014 diff hist 0 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014
- 15:33, 17 December 2014 diff hist 0 File:SplitOut.png Mktrost uploaded a new version of "File:SplitOut.png" current
- 15:22, 17 December 2014 diff hist 0 File:SnpcallDiagramNew.png Mktrost uploaded a new version of "File:SnpcallDiagramNew.png" current
- 15:18, 17 December 2014 diff hist 0 SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014
- 15:17, 17 December 2014 diff hist +13 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Logging Off
- 15:05, 17 December 2014 diff hist 0 File:GcConfNew.png Mktrost uploaded a new version of "File:GcConfNew.png" current
- 14:56, 17 December 2014 diff hist -113 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Setup when running on your own outside of the SeqShop Workshop
- 14:55, 17 December 2014 diff hist +1 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Setup when running on your own outside of the SeqShop Workshop
- 12:07, 17 December 2014 diff hist -33 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Download & Build GotCloud
- 11:09, 17 December 2014 diff hist 0 File:Dec2014 SeqShop - GotCloud snpcall.pdf Mktrost uploaded a new version of "File:Dec2014 SeqShop - GotCloud snpcall.pdf" current
- 20:40, 16 December 2014 diff hist +1,704 GotCloud: Versions
- 11:48, 16 December 2014 diff hist 0 File:RefDir.png Mktrost uploaded a new version of "File:RefDir.png" current
- 11:47, 16 December 2014 diff hist 0 File:RefDir.png Mktrost uploaded a new version of "File:RefDir.png"
- 10:56, 16 December 2014 diff hist +35 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Setup when running on your own outside of the SeqShop Workshop
- 10:53, 16 December 2014 diff hist 0 SeqShop: Sequence Mapping and Assembly Practical, December 2014
- 12:16, 15 December 2014 diff hist -191 SeqShop: Calling Your Own Genome, December 2014 →Wednesday FEEDBACK! current
- 12:16, 15 December 2014 diff hist -175 SeqShop: Calling Your Own Genome, December 2014 →Tuesday FEEDBACK!
- 12:15, 15 December 2014 diff hist -170 SeqShop: Calling Your Own Genome, December 2014 →WORKSHOP FEEDBACK!
- 16:36, 12 December 2014 diff hist +48 SeqShop: Calling Your Own Genome, December 2014 →Exonic Variants NOT found by 1000G
- 16:34, 12 December 2014 diff hist +181 SeqShop: Calling Your Own Genome, December 2014 →Exonic Variants NOT found by 1000G
- 16:31, 12 December 2014 diff hist +18 SeqShop: Calling Your Own Genome, December 2014 →Exonic Variants NOT found by 1000G
- 16:25, 12 December 2014 diff hist +125 SeqShop: Calling Your Own Genome, December 2014 →Exonic Variants NOT found by 1000G
- 16:22, 12 December 2014 diff hist +277 SeqShop: Calling Your Own Genome, December 2014 →Exonic Variants NOT found by 1000G
- 16:09, 12 December 2014 diff hist +1 SeqShop: Calling Your Own Genome, December 2014 →Exonic Variants NOT found by 1000G
- 15:58, 12 December 2014 diff hist +246 SeqShop: Calling Your Own Genome, December 2014 →Annotation / Lookup against dbSNP
- 15:22, 12 December 2014 diff hist +1 SeqShop: Calling Your Own Genome, December 2014 →Annotation / Lookup against dbSNP
- 12:43, 12 December 2014 diff hist -75 SeqShop: Ancestry On Your Own Genome, December 2014 →Visualizing Ancestry current
- 12:26, 12 December 2014 diff hist -100 SeqShop: Ancestry On Your Own Genome, December 2014 →Looking at Calling results
- 22:28, 11 December 2014 diff hist -97 SeqShop: December 2014
- 22:25, 11 December 2014 diff hist -36 SeqShop: Ancestry On Your Own Genome, December 2014 →Return to Calling your own Genome
- 22:24, 11 December 2014 diff hist -34 SeqShop: Calling Your Own Genome, December 2014 →Return to SeqShop: Ancestry On Your Own Genome, December 2014
- 22:24, 11 December 2014 diff hist -625 SeqShop: Calling Your Own Genome, December 2014 →Friday
- 22:21, 11 December 2014 diff hist +164 SeqShop: Genetic Association Analysis Practical, December 2014
- 22:21, 11 December 2014 diff hist +314 SeqShop: Ancestry On Your Own Genome, December 2014 →Run
- 22:18, 11 December 2014 diff hist -1 SeqShop: Calling Your Own Genome, December 2014 →WORKSHOP FEEDBACK!
- 22:13, 11 December 2014 diff hist +22 SeqShop: Ancestry On Your Own Genome, December 2014 →Step 1: bam --> pileup
- 22:08, 11 December 2014 diff hist -16 SeqShop: Ancestry On Your Own Genome, December 2014 →Step 1: bam --> pileup
- 22:05, 11 December 2014 diff hist +718 SeqShop: Ancestry On Your Own Genome, December 2014
- 21:30, 11 December 2014 diff hist 0 SeqShop: Calling Your Own Genome, December 2014
- 12:43, 11 December 2014 diff hist +44 SeqShop: December 2014
- 12:43, 11 December 2014 diff hist 0 N File:Seqshop genetic association analysis 141211.pdf current
- 11:39, 11 December 2014 diff hist +36 SeqShop: Calling Your Own Genome, December 2014 →Checking Completion
- 22:40, 10 December 2014 diff hist +169 SeqShop: Calling Your Own Genome, December 2014 →Friday: Reviewing SNPCALL Results
- 22:34, 10 December 2014 diff hist 0 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Step 1: bam --> pileup
- 22:33, 10 December 2014 diff hist +2 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Getting started
- 22:29, 10 December 2014 diff hist +60 SeqShop: Ancestry On Your Own Genome, December 2014 →Return to Calling your own Genome
- 22:26, 10 December 2014 diff hist +200 SeqShop: Calling Your Own Genome, December 2014 →Friday
- 22:25, 10 December 2014 diff hist +217 SeqShop: Ancestry On Your Own Genome, December 2014 →Step 1: bam --> pileup
- 22:21, 10 December 2014 diff hist +1 SeqShop: Ancestry On Your Own Genome, December 2014 →Setup your terminal
- 22:21, 10 December 2014 diff hist +36 SeqShop: Ancestry On Your Own Genome, December 2014
- 22:19, 10 December 2014 diff hist +179 SeqShop: Ancestry On Your Own Genome, December 2014
- 22:17, 10 December 2014 diff hist -283 SeqShop: Ancestry On Your Own Genome, December 2014
- 22:06, 10 December 2014 diff hist -62 SeqShop: Calling Your Own Genome, December 2014
- 22:06, 10 December 2014 diff hist -67 SeqShop: Calling Your Own Genome, December 2014 →Friday
- 21:59, 10 December 2014 diff hist +118 SeqShop: Calling Your Own Genome, December 2014 →Friday
- 21:45, 10 December 2014 diff hist +208 SeqShop: Calling Your Own Genome, December 2014 →Association Analysis Tutorial
- 21:41, 10 December 2014 diff hist +348 SeqShop: Genetic Association Analysis Practical, December 2014 →Setup in person at the SeqShop Workshop
- 21:33, 10 December 2014 diff hist +114 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Setup your run environment
- 21:29, 10 December 2014 diff hist +3 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Setup in person at the SeqShop Workshop
- 21:28, 10 December 2014 diff hist -13 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Setup in person at the SeqShop Workshop
- 21:27, 10 December 2014 diff hist +176 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Setup in person at the SeqShop Workshop
- 21:23, 10 December 2014 diff hist +13 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Setup when running on your own outside of the SeqShop Workshop
- 21:17, 10 December 2014 diff hist +2 SeqShop: Calling Your Own Genome, December 2014 →Friday: Reviewing SNPCALL Results
- 21:16, 10 December 2014 diff hist +658 SeqShop: Calling Your Own Genome, December 2014 →Friday: Reviewing Indel Results
- 21:09, 10 December 2014 diff hist +15 SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014
- 21:08, 10 December 2014 diff hist +14 SeqShop: Sequence Mapping and Assembly Practical, December 2014
- 21:05, 10 December 2014 diff hist -15 Template:SeqShopRemoteEnv current
- 20:56, 10 December 2014 diff hist +88 SeqShop: December 2014
- 20:53, 10 December 2014 diff hist +193 SeqShop: Ancestry On Your Own Genome, December 2014 →Visualizing Ancestry
- 20:51, 10 December 2014 diff hist +1 SeqShop: Calling Your Own Genome, December 2014 →Thursday
- 20:50, 10 December 2014 diff hist +7 SeqShop: Calling Your Own Genome, December 2014 →Checking Completion
- 20:46, 10 December 2014 diff hist -90 SeqShop: Calling Your Own Genome, December 2014 →Thursday
- 20:43, 10 December 2014 diff hist +892 SeqShop: Calling Your Own Genome, December 2014
- 20:23, 10 December 2014 diff hist -2 SeqShop: December 2014
- 20:23, 10 December 2014 diff hist -28 SeqShop: December 2014
- 20:08, 10 December 2014 diff hist +144 SeqShop: Estimates of Genetic Ancestry Practical, December 2014 →Visualizing results
- 20:07, 10 December 2014 diff hist +24 SeqShop: December 2014
- 20:06, 10 December 2014 diff hist 0 N File:DecWorshop2014-ancestry.pdf current
- 18:01, 10 December 2014 diff hist 0 SeqShop: December 2014
- 12:33, 10 December 2014 diff hist +37 SeqShop: Analysis of Structural Variation Practical, December 2014 →Setup your run environment
- 11:25, 10 December 2014 diff hist +4 SeqShop: Calling Your Own Genome, December 2014 →Looking at final INDEL VCF
- 11:18, 10 December 2014 diff hist +100 SeqShop: Calling Your Own Genome, December 2014
- 10:51, 10 December 2014 diff hist +445 SeqShop: Calling Your Own Genome, December 2014 →Configuring SnpCall
- 10:43, 10 December 2014 diff hist +2 SeqShop: Calling Your Own Genome, December 2014 →Structural Variation Tutorial
- 10:42, 10 December 2014 diff hist +1 SeqShop: Calling Your Own Genome, December 2014
- 10:37, 10 December 2014 diff hist +458 SeqShop: Calling Your Own Genome, December 2014 →Checking if INDEL Completed
- 19:34, 9 December 2014 diff hist +1 SeqShop: Calling Your Own Genome, December 2014 →Thursday
- 19:34, 9 December 2014 diff hist -49 SeqShop: Calling Your Own Genome, December 2014 →Log Out
- 19:34, 9 December 2014 diff hist -215 SeqShop: Calling Your Own Genome, December 2014 →Resume screen
- 19:33, 9 December 2014 diff hist -341 SeqShop: Calling Your Own Genome, December 2014
- 19:28, 9 December 2014 diff hist +398 SeqShop: Calling Your Own Genome, December 2014
- 19:25, 9 December 2014 diff hist +1,656 SeqShop: Calling Your Own Genome, December 2014
- 19:25, 9 December 2014 diff hist +139 SeqShop: Analysis of Structural Variation Practical, December 2014
- 19:24, 9 December 2014 diff hist +91 SeqShop: December 2014
- 19:23, 9 December 2014 diff hist +7 SeqShop: December 2014
- 19:02, 9 December 2014 diff hist +89 SeqShop: December 2014
- 18:52, 9 December 2014 diff hist +23 SeqShop: December 2014
- 18:52, 9 December 2014 diff hist 0 File:Mapping and assemblyDec2014.pdf Mktrost uploaded a new version of "File:Mapping and assemblyDec2014.pdf" current
- 18:50, 9 December 2014 diff hist 0 N File:Dec2014 Analysis of SV.pdf current
- 13:57, 9 December 2014 diff hist +41 SeqShop: December 2014
- 13:56, 9 December 2014 diff hist 0 File:Variant Calling and Filtering for INDELs.pdf Mktrost uploaded a new version of "File:Variant Calling and Filtering for INDELs.pdf" current
- 11:24, 9 December 2014 diff hist +102 SeqShop: December 2014
- 11:21, 9 December 2014 diff hist +79 SeqShop: Calling Your Own Genome, December 2014 →Setup
- 00:09, 9 December 2014 diff hist +1 SeqShop: Calling Your Own Genome, December 2014 →Indel Step 2 (Day 2): Checking Indel
- 00:08, 9 December 2014 diff hist +2,998 SeqShop: Calling Your Own Genome, December 2014 →Indel Step 2 (Day 2): Checking Indel
- 23:23, 8 December 2014 diff hist +208 SeqShop: Calling Your Own Genome, December 2014
- 23:22, 8 December 2014 diff hist +2,515 SeqShop: Calling Your Own Genome, December 2014
- 23:15, 8 December 2014 diff hist -1 SeqShop: Calling Your Own Genome, December 2014 →Configuration Updates
- 23:14, 8 December 2014 diff hist -2 SeqShop: Calling Your Own Genome, December 2014 →Configuration Updates
- 23:08, 8 December 2014 diff hist -1,236 SeqShop: Calling Your Own Genome, December 2014
- 22:55, 8 December 2014 diff hist +8 SeqShop: Calling Your Own Genome, December 2014
- 22:54, 8 December 2014 diff hist -85 SeqShop: Calling Your Own Genome, December 2014 →Running SnpCall
- 22:50, 8 December 2014 diff hist +2 SeqShop: Calling Your Own Genome, December 2014 →Configuring SnpCall
- 22:50, 8 December 2014 diff hist +2 SeqShop: Calling Your Own Genome, December 2014 →List of BAMs
- 22:48, 8 December 2014 diff hist +182 SeqShop: Calling Your Own Genome, December 2014 →Log Out
- 22:11, 8 December 2014 diff hist -1,473 SeqShop: Calling Your Own Genome, December 2014 →Chromosome 20
- 21:46, 8 December 2014 diff hist 0 SeqShop: Genetic Association Analysis Practical, December 2014
- 13:34, 8 December 2014 diff hist +948 SeqShop: Calling Your Own Genome, December 2014
- 12:38, 8 December 2014 diff hist -335 SeqShop: Calling Your Own Genome, December 2014 →Setup
- 12:37, 8 December 2014 diff hist -3 SeqShop: Calling Your Own Genome, December 2014 →Setup
- 11:08, 8 December 2014 diff hist +147 SeqShop: December 2014
- 10:39, 8 December 2014 diff hist 0 File:Mapping and assemblyDec2014.pdf Mktrost uploaded a new version of "File:Mapping and assemblyDec2014.pdf"
- 10:24, 8 December 2014 diff hist 0 SeqShop: December 2014
- 10:23, 8 December 2014 diff hist +294 SeqShop: Aligning Your Own Genome, December 2014 →Recalibration Comparison current
- 10:18, 8 December 2014 diff hist 0 N File:QplotComp.pdf current
- 10:14, 8 December 2014 diff hist +28 SeqShop: December 2014
- 10:13, 8 December 2014 diff hist 0 N File:Mapping and assemblyDec2014.pdf
- 00:53, 8 December 2014 diff hist +27 SeqShop: December 2014
- 00:31, 8 December 2014 diff hist 0 N File:Sequencing symposium 2014.pptx current
- 23:47, 7 December 2014 diff hist +4 SeqShop: December 2014
- 23:47, 7 December 2014 diff hist 0 File:Dec2014 SeqShop - Linux.pdf Mktrost uploaded a new version of "File:Dec2014 SeqShop - Linux.pdf" current
- 23:08, 7 December 2014 diff hist +799 SeqShop: Aligning Your Own Genome, December 2014 →Quality Control Output
- 22:56, 7 December 2014 diff hist +739 SeqShop: Aligning Your Own Genome, December 2014 →Quality Control Output
- 22:28, 7 December 2014 diff hist +165 SeqShop: Aligning Your Own Genome, December 2014 →Quality Control Output
- 22:27, 7 December 2014 diff hist +476 SeqShop: Aligning Your Own Genome, December 2014 →Alignment Pipeline Output
- 22:15, 7 December 2014 diff hist +85 SeqShop: Aligning Your Own Genome, December 2014 →FEEDBACK!
- 22:10, 7 December 2014 diff hist -1,437 SeqShop: Aligning Your Own Genome, December 2014
- 22:07, 7 December 2014 diff hist +1,634 SeqShop: Calling Your Own Genome, December 2014
- 22:03, 7 December 2014 diff hist +12 SeqShop: Aligning Your Own Genome, December 2014 →Created a GotCloud Configuration File
- 21:54, 7 December 2014 diff hist 0 SeqShop: Aligning Your Own Genome, December 2014 →Create your GotCloud Configuration File
- 21:54, 7 December 2014 diff hist +81 SeqShop: Aligning Your Own Genome, December 2014 →Locating your FASTQs
- 21:52, 7 December 2014 diff hist -6,504 SeqShop: Aligning Your Own Genome, December 2014 →I got sequence, how to I get my data ready to run?
- 21:39, 7 December 2014 diff hist +47 SeqShop: Aligning Your Own Genome, December 2014 →Goals of This Session
- 21:30, 7 December 2014 diff hist 0 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Running GotCloud Indel
- 21:26, 7 December 2014 diff hist -2 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Running GotCloud Indel
- 21:26, 7 December 2014 diff hist 0 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Examining GotCloud Indel Input files
- 21:25, 7 December 2014 diff hist 0 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Examining GotCloud Indel Input files
- 21:22, 7 December 2014 diff hist 0 N File:Dec2014 SeqShop - GotCloud indel.pdf current
- 21:21, 7 December 2014 diff hist +106 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Goals of This Session
- 21:19, 7 December 2014 diff hist 0 File:Dec2014 SeqShop - GotCloud snpcall.pdf Mktrost uploaded a new version of "File:Dec2014 SeqShop - GotCloud snpcall.pdf"
- 20:30, 7 December 2014 diff hist 0 SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014 →Running GotCloud Genotype Refinement
- 20:24, 7 December 2014 diff hist 0 File:Vcfsout.png Mktrost uploaded a new version of "File:Vcfsout.png" current
- 20:04, 7 December 2014 diff hist -177 SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014 →Run GotCloud SnpCall
- 20:00, 7 December 2014 diff hist 0 File:SnpcallStartNew.png Mktrost uploaded a new version of "File:SnpcallStartNew.png" current
- 19:58, 7 December 2014 diff hist -1 SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014 →Run GotCloud SnpCall
- 19:58, 7 December 2014 diff hist -1 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Run GotCloud Align
- 19:54, 7 December 2014 diff hist +108 SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014 →Run GotCloud SnpCall
- 19:52, 7 December 2014 diff hist 0 File:BamList2.png Mktrost uploaded a new version of "File:BamList2.png" current
- 19:46, 7 December 2014 diff hist +52 SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014 →GotCloud BAM List File
- 19:43, 7 December 2014 diff hist +19 SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014 →GotCloud BAM List File
- 19:43, 7 December 2014 diff hist 0 File:BamindexNew.png Mktrost uploaded a new version of "File:BamindexNew.png" current
- 19:42, 7 December 2014 diff hist 0 File:Dec2014 SeqShop - GotCloud snpcall.pdf Mktrost uploaded a new version of "File:Dec2014 SeqShop - GotCloud snpcall.pdf"
- 19:21, 7 December 2014 diff hist +60 SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014 →Introduction
- 19:20, 7 December 2014 diff hist 0 N File:Dec2014 SeqShop - GotCloud snpcall.pdf
- 18:26, 7 December 2014 diff hist +41 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Logging Off
- 18:02, 7 December 2014 diff hist +124 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Run GotCloud Align
- 17:59, 7 December 2014 diff hist 0 File:GcalignStartNew.png Mktrost uploaded a new version of "File:GcalignStartNew.png" current
- 17:53, 7 December 2014 diff hist 0 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Run GotCloud Align
- 17:39, 7 December 2014 diff hist +539 Template:SeqShopLogin
- 17:33, 7 December 2014 diff hist +83 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Setup your run environment
- 17:26, 7 December 2014 diff hist 0 File:Dec2014 SeqShop - GotCloud Align.pdf Mktrost uploaded a new version of "File:Dec2014 SeqShop - GotCloud Align.pdf" current
- 16:17, 7 December 2014 diff hist 0 File:Dec2014 SeqShop - Linux.pdf Mktrost uploaded a new version of "File:Dec2014 SeqShop - Linux.pdf"
- 15:24, 7 December 2014 diff hist +158 SeqShop: Aligning Your Own Genome, December 2014
- 15:22, 7 December 2014 diff hist 0 N File:Sequence Analysis Workshop-Risks viewing genetic information Dec2014.pdf current
- 14:02, 7 December 2014 diff hist +90 SeqShop: December 2014
- 14:01, 7 December 2014 diff hist 0 N File:SeqShopScheduleDec2014.pdf current
- 13:59, 7 December 2014 diff hist +53 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Introduction
- 13:56, 7 December 2014 diff hist -2 SeqShop: December 2014
- 13:55, 7 December 2014 diff hist 0 File:Dec2014 SeqShop - Linux.pdf Mktrost uploaded a new version of "File:Dec2014 SeqShop - Linux.pdf"
- 13:54, 7 December 2014 diff hist 0 N File:Dec2014 SeqShop - Linux.pdf
- 12:01, 7 December 2014 diff hist +53 SeqShop: December 2014
- 00:19, 7 December 2014 diff hist +8 SeqShop: Sequence Mapping and Assembly Practical, December 2014 →Introduction
- 00:18, 7 December 2014 diff hist 0 N File:Dec2014 SeqShop - GotCloud Align.pdf
- 23:27, 6 December 2014 diff hist +4 SeqShop: Ancestry On Your Own Genome, December 2014 →Setup
- 23:26, 6 December 2014 diff hist -136 SeqShop: Ancestry On Your Own Genome, December 2014 →Setup
- 17:57, 6 December 2014 diff hist +155 SeqShop: Calling Your Own Genome, December 2014
- 17:49, 6 December 2014 diff hist +155 SeqShop: Aligning Your Own Genome, December 2014 →Goals of This Session
- 15:47, 6 December 2014 diff hist -482 SeqShop: Aligning Your Own Genome, December 2014 →I didn't get sequenced, what can I do?
- 15:45, 6 December 2014 diff hist -3 SeqShop: Aligning Your Own Genome, December 2014 →Goals of This Session
- 15:44, 6 December 2014 diff hist +115 SeqShop: Aligning Your Own Genome, December 2014
- 15:26, 6 December 2014 diff hist +700 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Comparison with other data sets
- 15:14, 6 December 2014 diff hist +121 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Comparison with other data sets
- 15:11, 6 December 2014 diff hist 0 File:IndelRef.png Mktrost uploaded a new version of "File:IndelRef.png": Reverted to version as of 19:10, 6 December 2014 current
- 15:11, 6 December 2014 diff hist +101 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Comparison with other data sets
- 15:11, 6 December 2014 diff hist 0 File:IndelRef.png Mktrost uploaded a new version of "File:IndelRef.png"
- 15:10, 6 December 2014 diff hist 0 File:IndelRef.png Mktrost uploaded a new version of "File:IndelRef.png"
- 01:22, 6 December 2014 diff hist +42 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Summary
- 01:16, 6 December 2014 diff hist +2 SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014 →Records