User contributions
9 May 2013
LocusZoom Standalone 1.2
Sources of information
+98
LocusZoom Standalone 1.2
EPACTS formatted file
+4
LocusZoom Standalone 1.2
EPACTS formatted file
+1,784
LocusZoom Standalone 1.2
Association results file
+33
LocusZoom Standalone 1.2
Association results file ("metal" file)
+21
LocusZoom Standalone 1.2
Supply VCF files for calculating LD
+36
LocusZoom Standalone 1.2
Supply VCF files for calculating LD
+181
LocusZoom Standalone 1.2
Batch mode
+1
LocusZoom Standalone 1.2
Supply VCF files for calculating LD
+1
LocusZoom Standalone 1.2
Supply VCF files for calculating LD
+7
LocusZoom Standalone 1.2
Input
+561
LocusZoom Standalone 1.2
Specifying LD source/population/build
+233
LocusZoom Standalone 1.2
Specifying LD source/population/build
+82
LocusZoom Standalone 1.2
Step 3: Install LD calculation software (optional)
+36
LocusZoom Standalone 1.2
Step 3: Install LD calculation software (optional)
+12
LocusZoom Standalone 1.2
Step 3: Install LD calculation software (optional)
-14
LocusZoom Standalone 1.2
Step 3: Install LD calculation software (optional)
+10
LocusZoom Standalone 1.2
Installation
-15
LocusZoom Standalone 1.2
Step 3: Install new_fugue
+364
LocusZoom Standalone 1.2
Created page with '{| align="right" |- | __TOC__ |} <br> Image:LocusZoomSmall.png This page contains information regarding a version of LocusZoom that may be downloaded for personal use. For…'
LocusZoom Standalone
Use HapMap YRI for LD
+29
LocusZoom Standalone
Examples
-114
24 April 2013
LocusZoom Standalone
Step 5: Install LocusZoom
+9
LocusZoom Standalone
Installation
LocusZoom Standalone
Installation
+2
LocusZoom Standalone
Installation
+35
LocusZoom Standalone
Synopsis
-34
17 August 2011
4 August 2011
29 July 2011
LocusZoom Standalone
Changing m2zfast.conf settings
-11
LocusZoom Standalone
User-supplied LD
+108
LocusZoom Standalone
no edit summary
-495
LocusZoom Standalone
Specifying LD source/population/build
+241
LocusZoom Standalone
Region
+218
LocusZoom Standalone
Sources of information
-10
LocusZoom Standalone
Installation
+417
LocusZoom Standalone
no edit summary
+81
5 April 2011
4 April 2011
Garlic
Reporting bugs/issues
+95
Garlic
no edit summary
+54
Garlic
Output
+487
Garlic
Running garlic
-4
Garlic
Created page with '{| align="right" |- | __TOC__ |} Garlic is a quality control program for GWAS association results. These results would typically be fed into a meta-analysis program such as META…'
27 September 2010
New Fugue
Download
+91
LocusZoom Standalone
An example using plotting parameters
-7
LocusZoom Standalone
An example using plotting parameters
+231
LocusZoom Standalone
Examples
+165
LocusZoom Standalone
Association results file ("metal" file)
LocusZoom Standalone
LocusZoom options
+6
LocusZoom Standalone
LocusZoom options
-2
