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- (hist) Gzip [411 bytes]
- (hist) Sara Rashkin [425 bytes]
- (hist) Sean Caron [434 bytes]
- (hist) 830 - MarkovModel::Condition() [440 bytes]
- (hist) Mary Kate Wing [448 bytes]
- (hist) Phred scale [449 bytes]
- (hist) Tom Blackwell [451 bytes]
- (hist) 830 - Haplotyper::ScoreLeftConditional() [453 bytes]
- (hist) METAL EFFECTLABEL [463 bytes]
- (hist) 830 - MarkovModel::CountRecombinants() [487 bytes]
- (hist) 830 - MaqIndex::GetWord() [500 bytes]
- (hist) BamPileup [501 bytes]
- (hist) 830 - MarkovModel::CountErrors() [508 bytes]
- (hist) 830 - Haplotyper::SampleOneHaplotype() [513 bytes]
- (hist) Biostatistics 666: Linkage Tests for Pairs of Individuals [518 bytes]
- (hist) METAL ADDFILTER [522 bytes]
- (hist) Computer How-Tos [522 bytes]
- (hist) Biostatistics 666: Relationship Checking [526 bytes]
- (hist) Idriver [526 bytes]
- (hist) Biostatistics 666: Analysis of Copy Number Using Sequence Data [529 bytes]
- (hist) Biostatistics 666: Introduction to the E-M Algorithm [530 bytes]
- (hist) Dajiang Liu [544 bytes]
- (hist) Lars Fritsche [548 bytes]
- (hist) Biostatistics 666: Rare Variant Burden Tests [553 bytes]
- (hist) 830 - MarkovModel::Transpose() [565 bytes]
- (hist) Biostatistics 666: Advanced Coalescent, Computation with the Coalescent [571 bytes]
- (hist) Biostatistics 666: Power of Genomewide Association Studies [575 bytes]
- (hist) Alan Kwong [608 bytes]
- (hist) 830 - MaqIndex::BuildIndex() [613 bytes]
- (hist) 830 - BestAlignment::EvaluateAlignment() (detailed comparison) [616 bytes]
- (hist) Biostatistics 666: Advanced Haplotype Estimation [617 bytes]
- (hist) Biostatistics 666: Genotype Imputation [618 bytes]
- (hist) Read Mapping [620 bytes]
- (hist) Biostatistics 666: Applications of the Lander-Green Algorithm [622 bytes]
- (hist) Genotype Likelihood Based Allele Balance [626 bytes]
- (hist) Jennifer Bragg-Gresham [635 bytes]
- (hist) MaCH Options [640 bytes]
- (hist) RAREFY DOWNLOAD [644 bytes]
- (hist) Scott Vrieze [645 bytes]
- (hist) MaCH: Pedigree with Integer Allele Codes [649 bytes]
- (hist) Indel [650 bytes]
- (hist) Biostatistics 666: Introduction to De Novo Assembly [650 bytes]
- (hist) 830 - MarkovModel::WalkLeft() [654 bytes]
- (hist) SeqShop: Friday - Practicing what we learned, June 2014 [663 bytes]
- (hist) Biostatistics 666: Modeling Variation in the Coalescent [664 bytes]
- (hist) 830 - Haplotyper::ConditionOnData() [666 bytes]
- (hist) 830 - Haplotyper::ImputeGenotypes() (edge) [673 bytes]
- (hist) METAL VERBOSE [691 bytes]
- (hist) Biostatistics 666: Linkage Analysis in Sibling Pairs [693 bytes]
- (hist) Biostatistics 666: Analysis of Low Pass Sequence Data [721 bytes]
- (hist) 830 - Haplotyper::ImputeGenotypes() [722 bytes]
- (hist) BAM [731 bytes]
- (hist) Biostatistics 666: Maximum Likelihood Allele Frequency Estimation [757 bytes]
- (hist) Biostatistics 666: Haplotype Estimation [782 bytes]
- (hist) 830 - Haplotyper::SampleHaplotypes() [788 bytes]
- (hist) Fst [799 bytes]
- (hist) METAL SOURCE [820 bytes]
- (hist) METAL CUSTOMVARIABLE [834 bytes]
- (hist) Hardy Weinberg equilibrium [841 bytes]
- (hist) FASTA [843 bytes]
- (hist) 830 - Haplotyper::ImputeGenotypes() (internal) [860 bytes]
- (hist) Short Workshops [878 bytes]
- (hist) RAREFY [882 bytes]
- (hist) Biostatistics 666: Hardy-Weinberg Equilibrium [885 bytes]
- (hist) Biostatistics 666: Modeling Recombination and Migration in the Coalescent [889 bytes]
- (hist) Biostatistics 666: Course Introduction and Hardy Weinberg Equilibrium [901 bytes]
- (hist) Zlib [905 bytes]
- (hist) Example [905 bytes]
- (hist) GotCloud: Amazon [916 bytes]
- (hist) NHLBI Exome Sequencing Project [918 bytes]
- (hist) How to use aspera [953 bytes]
- (hist) Links to Sequence Analysis Tools [964 bytes]
- (hist) 830 - Haplotyper::ScoreLeftConditional() (smart, complicated) [966 bytes]
- (hist) 830 - MarkovModel::WalkRight() [974 bytes]
- (hist) Biostatistics 666: Contemporary Human Genetics [988 bytes]
- (hist) Raremetal Incoming updates [1,004 bytes]
- (hist) Parameters.h [1,078 bytes]
- (hist) 830 - MaqIndex::LookupWord() [1,085 bytes]
- (hist) VcfGenomeStat [1,093 bytes]
- (hist) StatgenTools [1,109 bytes]
- (hist) Biostatistics 666: Haplotype Association Tests [1,119 bytes]
- (hist) Mach2dat: Association with MACH output [1,151 bytes]
- (hist) 830 - Haplotyper::SummarizeOptions() [1,151 bytes]
- (hist) MaCH [1,154 bytes]
- (hist) BamUtil: dumpHeader [1,167 bytes]
- (hist) Goncalo Abecasis [1,193 bytes]
- (hist) Screen Commands [1,225 bytes]
- (hist) Gene Ontology [1,226 bytes]
- (hist) Outcomes For Mapping A Paired End [1,228 bytes]
- (hist) Biostatistics 666: Association Tests in Structured Populations [1,232 bytes]
- (hist) 830 - BestAlignment::MaqAlignment() [1,256 bytes]
- (hist) 830 - MarkovModel::CountErrorsAndRecombinants() [1,257 bytes]
- (hist) RAREMETAL DOWNLOAD & BUILD [1,267 bytes]
- (hist) Stouffer Method for Meta-Analysis [1,268 bytes]
- (hist) BamUtil: readIndexedBam [1,288 bytes]
- (hist) METAL FAQ [1,309 bytes]
- (hist) 830 - MarkovModel::Impute() [1,345 bytes]
- (hist) BamUtil: dumpIndex [1,366 bytes]
- (hist) 830 - Haplotyper::SampleChromosomes() [1,380 bytes]
- (hist) Tutorial: EMMAX GotCloud STOM [1,388 bytes]