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mLine 77:
Line 77: − ABI SOLiD platform generated FASTA file (e.g. XXX.csfasta) and quality file (e.g. XXX\_QV.qual) separately. We wrote a script, ''solid2csfastq.py'', to convert it to color space FASTQ file(e.g. XXX.csfastq). We believe a single color space FASTQ file will simplify post processing.<br>+
→Auxiliary tools
== Auxiliary tools ==
== Auxiliary tools ==
The ABI SOLiD platform generates separate FASTA files (e.g. XXX.csfasta) and quality files (e.g. XXX\_QV.qual). We provide a script, ''solid2csfastq.py'', to convert these into a single color space FASTQ file (e.g. XXX.csfastq). We believe a single color space FASTQ file simplifies post processing.<br>
== Choose an appropriate size for word index ==
== Choose an appropriate size for word index ==
