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, 10:14, 1 June 2016
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| == Reference Files == | | == Reference Files == |
| We provide two kinds of reference files. The difference between these reference data are LD buddy definitions. | | We provide two kinds of reference files. The difference between these reference data are LD buddy definitions. |
− | LD window size = 1MB; LD r2 ≥ 0.7: | + | *LD window size = 1MB; LD r2 ≥ 0.7: |
− | All LD buddies are in window size 1MB and r2 is greater than and equals to 0.7. If you want to calculate LD buddies in 1MB and r2 ≥ 0.7 (such as 0.9,0.8,0.7), please use these reference data.
| + | **All LD buddies are in window size 1MB and r2 is greater than and equals to 0.7. If you want to calculate LD buddies in 1MB and r2 ≥ 0.7 (such as 0.9,0.8,0.7), please use these reference data. |
− | LD window size = 1MB; LD r2 ≥ 0.2: | + | *LD window size = 1MB; LD r2 ≥ 0.2: |
− | All LD buddies are in window size 1MB and r2 is greater than and equals to 0.2. If you want to calculate LD buddies in 1MB and r2 ≥ 0.2 (such as 0.6,0.5,0.4,0.3,0.2), please use these reference data.
| + | **All LD buddies are in window size 1MB and r2 is greater than and equals to 0.2. If you want to calculate LD buddies in 1MB and r2 ≥ 0.2 (such as 0.6,0.5,0.4,0.3,0.2), please use these reference data. |
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| == Results Output == | | == Results Output == |
| The file StatisticSummaryFile.txt in the output directory contains enrichment results with the following information: | | The file StatisticSummaryFile.txt in the output directory contains enrichment results with the following information: |