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, 13:27, 21 May 2012
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| When a record is found in both input files, but a difference is found, the record from the first file is written with additional tags to indicate the values from the second file, using the following tags: | | When a record is found in both input files, but a difference is found, the record from the first file is written with additional tags to indicate the values from the second file, using the following tags: |
| * ZF - Flag | | * ZF - Flag |
− | * ZP - Chrom/Pos | + | * ZP - Chromosome:1-based Position |
| * ZC - Cigar | | * ZC - Cigar |
| * ZM - Mapping Quality | | * ZM - Mapping Quality |
− | * ZN - Mate chrom/pos | + | * ZN - Chromosome:1-based Mate Position |
| * ZI - Insert Size | | * ZI - Insert Size |
| * ZS - Sequence | | * ZS - Sequence |