SeqShop: December 2014: Difference between revisions

Revision as of 10:24, 8 December 2014

Sequence Analysis Workshop December 8-12, 2014: http://seqshop.sph.umich.edu/

Monday	Lecture	Practical
	Brief Introduction and Background	SeqShop: Practical Intro
	Design of Human Genetic Studies	SeqShop: Sequence Mapping and Assembly Practical
	Sequence Mapping and Assembly	Live experimentation with IOBIO
		SeqShop: Aligning Your Own Genome
Tuesday	Lecture	Practical
	Variant Calling and Filtering for SNPs	SeqShop: Variant Calling and Filtering for SNPs Practical
	Variant Calling and Filtering for INDELs	SeqShop: Variant Calling and Filtering for INDELs Practical
Wednesday	Lecture	Practical
	Analysis of Structural Variation - Part 1 Analysis of Structural Variation - Part 2	SeqShop: Analysis of Structural Variation Practical
Thursday	Lecture	Practical
	Estimates of Genetic Ancestry	SeqShop: Estimates of Genetic Ancestry Practical
	Genetic Association Analysis	SeqShop: Genetic Association Analysis Practical
Friday	Lecture	Practical
	Example of a Whole Genome Association Study	SeqShop: Friday - Practicing what we learned

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 Workshop Schedule: [[Media:SeqShopScheduleDec2014.pdf|SeqShopScheduleDec2014.pdf]]
-[[Media:2014.12_-_Workshop_Introduction.pdf|Brief Introduction and Background]]
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-| [[Media:Sequencing symposium 2014.pptx|Design of Human Genetic Studies]]
+| [[Media:2014.12_-_Workshop_Introduction.pdf|Brief Introduction and Background]]
 | [[Media:Dec2014 SeqShop - Linux.pdf|SeqShop: Practical Intro]]
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-| [[Media:Mapping and assemblyDec2014.pdf|Sequence Mapping and Assembly]]
+| [[Media:Sequencing symposium 2014.pptx|Design of Human Genetic Studies]]
 | [[SeqShop: Sequence Mapping and Assembly Practical, December 2014|SeqShop: Sequence Mapping and Assembly Practical]]
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+| [[Media:Mapping and assemblyDec2014.pdf|Sequence Mapping and Assembly]]
 | [http://iobio.io Live experimentation with IOBIO]
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