Oldest pages

From Genome Analysis Wiki
Jump to navigationJump to search

Showing below up to 250 results in range #1 to #250.

View (previous 250 | next 250) (20 | 50 | 100 | 250 | 500)

  1. Parameters.h‏‎ (03:26, 26 November 2009)
  2. StringMap.h‏‎ (03:31, 26 November 2009)
  3. Utility Library‏‎ (03:32, 26 November 2009)
  4. Mantra.cpp‏‎ (15:09, 8 December 2009)
  5. CHARGE‏‎ (19:05, 17 December 2009)
  6. An example of using libcsg‏‎ (00:39, 15 January 2010)
  7. Karma-colorspace‏‎ (23:54, 27 January 2010)
  8. Biostatistics 666: Advanced Coalescent, Changing Population Size‏‎ (23:00, 15 February 2010)
  9. Biostatistics 666: Advanced Coalescent, Computation with the Coalescent‏‎ (23:01, 15 February 2010)
  10. Mapping Quality Scores‏‎ (03:21, 18 February 2010)
  11. Outcomes For Mapping A Paired End‏‎ (16:52, 19 February 2010)
  12. Links to Sequence Analysis Tools‏‎ (11:42, 26 February 2010)
  13. 1000 Genomes Project Pilot 1 SNP Calling‏‎ (13:35, 10 March 2010)
  14. Base Caller Summaries‏‎ (17:04, 12 March 2010)
  15. MappabilityScores‏‎ (07:17, 18 March 2010)
  16. Biostatistics 666: The Possible Triangle Constraint‏‎ (07:43, 23 March 2010)
  17. Phred scale‏‎ (16:17, 23 March 2010)
  18. Biostatistics 666: Multipoint Analysis in Sibling Pairs‏‎ (19:33, 23 March 2010)
  19. FASTA‏‎ (19:39, 23 March 2010)
  20. Biostatistics 666: Relationship Checking‏‎ (05:59, 30 March 2010)
  21. METAL Glucose Example Script‏‎ (07:14, 30 March 2010)
  22. GWAS‏‎ (11:39, 30 March 2010)
  23. Biostatistics 666: The Lander-Green Algorithm‏‎ (00:52, 1 April 2010)
  24. Gene Ontology‏‎ (01:32, 2 April 2010)
  25. Stouffer Method for Meta-Analysis‏‎ (11:55, 5 April 2010)
  26. METAL Quick Start‏‎ (13:11, 5 April 2010)
  27. METAL COLUMNCOUNTING‏‎ (00:21, 6 April 2010)
  28. METAL LOGPVALUE‏‎ (00:22, 6 April 2010)
  29. METAL CUSTOMVARIABLE‏‎ (00:24, 6 April 2010)
  30. METAL ADDFILTER‏‎ (00:32, 6 April 2010)
  31. METAL VERBOSE‏‎ (00:36, 6 April 2010)
  32. METAL SOURCE‏‎ (00:39, 6 April 2010)
  33. METAL EFFECTLABEL‏‎ (00:39, 6 April 2010)
  34. Biostatistics 666: Applications of the Lander-Green Algorithm‏‎ (23:13, 7 April 2010)
  35. C++ Class: Pedigree Example‏‎ (16:37, 13 April 2010)
  36. Kyoto Encyclopedia of Genes and Genomes‏‎ (00:13, 21 April 2010)
  37. Verifying Sample Identities - Implementation‏‎ (10:25, 29 April 2010)
  38. TinySimulator‏‎ (19:26, 7 May 2010)
  39. Merlin‏‎ (00:16, 20 May 2010)
  40. Generic Exome Analysis Plan‏‎ (13:07, 21 May 2010)
  41. Biostatistics 666: Linkage Tests for Pairs of Individuals‏‎ (10:37, 26 May 2010)
  42. Indel‏‎ (20:44, 30 May 2010)
  43. GlfMerge‏‎ (03:36, 4 June 2010)
  44. PedScript‏‎ (05:23, 4 June 2010)
  45. MaCH: Pedigree with Integer Allele Codes‏‎ (10:24, 4 June 2010)
  46. METAL FAQ‏‎ (11:54, 9 June 2010)
  47. GlfMultiples‏‎ (10:23, 16 June 2010)
  48. Power Calculations: Quantitative Traits‏‎ (11:02, 17 June 2010)
  49. MERLIN format‏‎ (04:32, 22 June 2010)
  50. MaCH Options‏‎ (22:35, 28 June 2010)
  51. C++ Class Averages‏‎ (12:27, 2 August 2010)
  52. CigarRoller Proposed Update‏‎ (11:11, 4 August 2010)
  53. BaseQualityCheck‏‎ (04:35, 27 August 2010)
  54. SAM Validation Criteria‏‎ (15:51, 27 August 2010)
  55. Biostatistics 666: Introductory Lecture‏‎ (10:14, 7 September 2010)
  56. Gzip File‏‎ (23:16, 8 September 2010)
  57. Evaluating a Read Mapper on Simulated Data‏‎ (23:19, 8 September 2010)
  58. NHLBI Exome Sequencing Project‏‎ (21:44, 14 September 2010)
  59. SAM: Filtering Reads‏‎ (17:25, 21 September 2010)
  60. New Fugue‏‎ (13:35, 27 September 2010)
  61. Tramp‏‎ (23:47, 29 September 2010)
  62. Fst‏‎ (03:47, 3 October 2010)
  63. Biostatistics 666: Haplotype Association Tests‏‎ (00:34, 12 October 2010)
  64. Haploxt‏‎ (18:22, 21 October 2010)
  65. Genotype Likelihood Based Allele Balance‏‎ (15:22, 22 October 2010)
  66. Biostatistics 666: Association Tests in Structured Populations‏‎ (04:30, 26 October 2010)
  67. VcfGenomeStat‏‎ (00:35, 2 November 2010)
  68. Read Mapping‏‎ (22:53, 17 November 2010)
  69. Gzip‏‎ (22:53, 17 November 2010)
  70. RelativeFinder‏‎ (04:17, 23 November 2010)
  71. MaCH‏‎ (08:34, 26 November 2010)
  72. Biostatistics 666: Analysis of Low Pass Sequence Data‏‎ (23:32, 1 December 2010)
  73. Biostatistics 666: Copy Number Variation‏‎ (21:05, 2 December 2010)
  74. Variant Call Pipeline‏‎ (15:36, 21 December 2010)
  75. Meta Analysis of SNPxEnvironment Interaction‏‎ (12:24, 10 January 2011)
  76. Example‏‎ (15:39, 30 January 2011)
  77. Editing Sequence Analysis Practice 2011/03/10‏‎ (02:14, 10 March 2011)
  78. Sequence Analysis Practice 2011/03/09‏‎ (13:29, 10 March 2011)
  79. METAL GENOMICCONTROL‏‎ (07:34, 25 March 2011)
  80. METAL Command Reference‏‎ (07:36, 25 March 2011)
  81. METAL‏‎ (10:33, 25 March 2011)
  82. Makefile.tool‏‎ (17:20, 28 March 2011)
  83. Garlic‏‎ (15:46, 5 April 2011)
  84. Git Cheat Sheet‏‎ (19:13, 7 July 2011)
  85. Using Git Example‏‎ (17:51, 12 July 2011)
  86. Bar Harbor Statistical Genetics Workshop‏‎ (14:54, 21 July 2011)
  87. Basic Linux Intro‏‎ (15:46, 26 July 2011)
  88. Computer How-Tos‏‎ (10:51, 27 July 2011)
  89. MaCH: 1000 Genomes Imputation Cookbook‏‎ (03:08, 28 July 2011)
  90. Hardy Weinberg equilibrium‏‎ (07:12, 5 August 2011)
  91. LiftRsNumber.py‏‎ (11:33, 10 August 2011)
  92. IMPUTE2‏‎ (16:17, 10 August 2011)
  93. LibStatGen Repository‏‎ (15:24, 23 August 2011)
  94. Biostatistics 615/815 Winter 2011‏‎ (00:10, 6 September 2011)
  95. Sam Library Usage Examples‏‎ (09:07, 7 September 2011)
  96. FastQ Validation Criteria‏‎ (14:01, 7 September 2011)
  97. StatgenTools‏‎ (13:06, 9 September 2011)
  98. How To Use Git‏‎ (16:58, 9 September 2011)
  99. Biostatistics 666: Course Introduction and Hardy Weinberg Equilibrium‏‎ (07:33, 12 September 2011)
  100. Better X Sessions from Home (NX)‏‎ (12:51, 8 November 2011)
  101. Biostatistics 666: Rare Variant Burden Tests‏‎ (07:48, 30 November 2011)
  102. Biostatistics 666: Analysis of Copy Number Using Sequence Data‏‎ (09:14, 5 December 2011)
  103. Biostatistics 666: Likelihood Calculations for Large Pedigrees‏‎ (04:48, 7 December 2011)
  104. Installing MinGW & MSYS on Windows‏‎ (12:30, 18 January 2012)
  105. Vpeep‏‎ (11:48, 19 January 2012)
  106. ThunderVCF‏‎ (07:42, 23 January 2012)
  107. Vmatch‏‎ (17:11, 23 January 2012)
  108. Arf‏‎ (18:38, 2 February 2012)
  109. FTEC‏‎ (11:21, 17 February 2012)
  110. BamUtil: indelDiscordance‏‎ (16:10, 23 February 2012)
  111. Pileup‏‎ (15:06, 3 April 2012)
  112. VCF‏‎ (18:10, 18 April 2012)
  113. LibStatGen: ASP‏‎ (11:45, 30 April 2012)
  114. GlfTrio‏‎ (12:45, 1 May 2012)
  115. C++ Library: FASTQ Change Log‏‎ (12:56, 1 May 2012)
  116. C++ Library: general Change Log‏‎ (12:57, 1 May 2012)
  117. StatsTools‏‎ (17:17, 1 June 2012)
  118. LiftMap.py‏‎ (23:18, 18 June 2012)
  119. Bam read count‏‎ (15:29, 14 August 2012)
  120. Biostatistics 615/815 Fall 2011‏‎ (17:35, 31 August 2012)
  121. SNP Call Set Properties‏‎ (19:08, 10 September 2012)
  122. IMPUTE2: 1000 Genomes Imputation Cookbook‏‎ (05:19, 11 September 2012)
  123. Biostatistics 815 Term Project‏‎ (23:35, 19 September 2012)
  124. IGFPipe‏‎ (15:12, 2 November 2012)
  125. AWS Resources‏‎ (13:44, 15 November 2012)
  126. Biostatistics 666: Core Competencies‏‎ (06:56, 5 December 2012)
  127. Biostatistics 615/815: Main Page‏‎ (21:53, 18 December 2012)
  128. LibStatGen: VCF‏‎ (16:09, 23 January 2013)
  129. Mach2dat: Association with MACH output‏‎ (22:12, 5 February 2013)
  130. Vcf2geno‏‎ (17:01, 19 February 2013)
  131. GBR60vc.conf‏‎ (02:05, 25 February 2013)
  132. BAM‏‎ (23:16, 26 February 2013)
  133. BamPileup‏‎ (18:08, 28 February 2013)
  134. Understanding VerifyBamID output‏‎ (16:48, 4 March 2013)
  135. RareMetals‏‎ (22:06, 6 March 2013)
  136. HAPMIX‏‎ (14:05, 13 March 2013)
  137. Polymutt beta‏‎ (12:42, 17 March 2013)
  138. GotCloud: RedHat Package‏‎ (16:31, 18 March 2013)
  139. Rare-metal-worker‏‎ (21:31, 31 March 2013)
  140. MutationFilter‏‎ (01:06, 16 April 2013)
  141. How to use aspera‏‎ (00:56, 9 May 2013)
  142. Amazon Snapshot‏‎ (13:06, 20 May 2013)
  143. Creating a Snapshot on EC2‏‎ (13:12, 20 May 2013)
  144. Trial Enrichment‏‎ (18:28, 21 May 2013)
  145. Goncalo Abecasis: Interview with Christiana Fogg‏‎ (14:56, 7 June 2013)
  146. BAM to FASTQ‏‎ (10:45, 10 June 2013)
  147. Mary Kate Wing‏‎ (14:52, 17 June 2013)
  148. Jennifer Bragg-Gresham‏‎ (10:18, 18 June 2013)
  149. Lars Fritsche‏‎ (13:16, 27 June 2013)
  150. Sara Rashkin‏‎ (13:18, 27 June 2013)
  151. Ben Lerch‏‎ (13:21, 27 June 2013)
  152. Tom Blackwell‏‎ (17:06, 28 June 2013)
  153. SardiNIA project meeting July 15-16, 2013‏‎ (11:46, 8 July 2013)
  154. Goncalo Abecasis‏‎ (01:51, 3 August 2013)
  155. Exome Chip Design‏‎ (07:42, 6 August 2013)
  156. Tutorial: GotCloud UW CMG‏‎ (16:15, 6 August 2013)
  157. GLF‏‎ (11:22, 13 August 2013)
  158. Biostatistics 830: Core Competencies‏‎ (09:27, 4 September 2013)
  159. FamRvTest tutorial‏‎ (14:33, 10 September 2013)
  160. Ligate Minimac‏‎ (15:06, 10 September 2013)
  161. PileupBasedVariantCalling‏‎ (15:52, 10 September 2013)
  162. 830 - Haplotyper::Transpose()‏‎ (14:52, 13 September 2013)
  163. 830 - Haplotyper::SetupPrior()‏‎ (14:56, 13 September 2013)
  164. 830 - Haplotyper::ConditionOnData()‏‎ (14:58, 13 September 2013)
  165. 830 - Haplotyper::RandomSetup()‏‎ (15:56, 13 September 2013)
  166. 830 - MarkovModel::Transpose()‏‎ (14:39, 25 September 2013)
  167. 830 - MarkovModel::Condition()‏‎ (14:40, 25 September 2013)
  168. 830 - MarkovModel::WalkRight()‏‎ (14:45, 25 September 2013)
  169. 830 - MarkovModel::Impute()‏‎ (14:50, 25 September 2013)
  170. 830 - MarkovModel::CountRecombinants()‏‎ (14:54, 25 September 2013)
  171. 830 - MarkovModel::CountErrors()‏‎ (14:57, 25 September 2013)
  172. 830 - MarkovModel::CountErrorsAndRecombinants()‏‎ (15:01, 25 September 2013)
  173. GlfSingle‏‎ (11:34, 26 September 2013)
  174. 830 - Haplotyper::ScoreLeftConditional()‏‎ (13:30, 2 October 2013)
  175. 830 - Haplotyper::SampleHaplotypes()‏‎ (14:10, 2 October 2013)
  176. 830 - Haplotyper::SampleChromosomes()‏‎ (14:11, 2 October 2013)
  177. 830 - Haplotyper::ImputeGenotypes()‏‎ (14:19, 2 October 2013)
  178. 830 - Haplotyper::ScoreLeftConditional() (smart, complicated)‏‎ (14:31, 2 October 2013)
  179. 830 - MINIMAC::main()‏‎ (15:06, 2 October 2013)
  180. 830 - Haplotyper::SummarizeOptions()‏‎ (15:55, 2 October 2013)
  181. 830 - Haplotyper::SampleOneHaplotype()‏‎ (16:03, 2 October 2013)
  182. 830 - Haplotyper::ImputeGenotypes() (internal)‏‎ (16:15, 2 October 2013)
  183. 830 - Haplotyper::ImputeGenotypes() (edge)‏‎ (16:16, 2 October 2013)
  184. Rare Variant Analysis and Meta-Analysis‏‎ (11:13, 3 October 2013)
  185. Scott Vrieze‏‎ (09:16, 4 October 2013)
  186. Mount S3 Volume‏‎ (14:05, 10 October 2013)
  187. 830 - BasicMapper::main()‏‎ (13:29, 28 October 2013)
  188. 830 - MaqIndex::CompareToIndex()‏‎ (13:34, 28 October 2013)
  189. 830 - MaqIndex::BuildIndex()‏‎ (13:38, 28 October 2013)
  190. 830 - MaqIndex::GetWord()‏‎ (13:39, 28 October 2013)
  191. 830 - BestAlignment::MaqAlignment()‏‎ (13:45, 28 October 2013)
  192. 830 - BestAlignment::EvaluateAlignment() (main loop)‏‎ (13:46, 28 October 2013)
  193. 830 - BestAlignment::EvaluateAlignment() (detailed comparison)‏‎ (13:47, 28 October 2013)
  194. 830 - BestAlignment::isNewPosition()‏‎ (13:51, 28 October 2013)
  195. 830 - BestAlignment::ClearPositions()‏‎ (13:53, 28 October 2013)
  196. Biostatistics 830 - Code Snippets‏‎ (13:53, 28 October 2013)
  197. 830 - BestAlignment::IterateCache()‏‎ (13:58, 28 October 2013)
  198. 830 - MaqIndex::LookupWord()‏‎ (16:09, 28 October 2013)
  199. SEQMIX‏‎ (03:07, 4 November 2013)
  200. Code Sample: Generating QQ Plots in R‏‎ (14:14, 12 November 2013)
  201. EMADS‏‎ (23:03, 14 November 2013)
  202. EMADS Primary Analysis Plan‏‎ (23:03, 14 November 2013)
  203. Biostatistics 602: Main Page‏‎ (10:29, 26 November 2013)
  204. BamUtil: asp‏‎ (17:38, 3 January 2014)
  205. BamUtil: dumpAsp‏‎ (17:39, 3 January 2014)
  206. BamUtil: splitChromosome‏‎ (17:43, 3 January 2014)
  207. BamUtil: findCigars‏‎ (18:27, 3 January 2014)
  208. BamUtil: convert‏‎ (18:27, 3 January 2014)
  209. BamUtil: splitBam‏‎ (18:28, 3 January 2014)
  210. Tutorial: EMMAX GotCloud STOM: Lecture 2‏‎ (03:07, 6 January 2014)
  211. Tutorial: EMMAX GotCloud STOM: Lecture 6‏‎ (09:58, 6 January 2014)
  212. Tutorial: EMMAX GotCloud STOM: Lecture 5‏‎ (10:07, 6 January 2014)
  213. Tutorial: EMMAX GotCloud STOM‏‎ (10:56, 6 January 2014)
  214. BamUtil: writeRegion‏‎ (12:30, 6 January 2014)
  215. BamUtil: validate‏‎ (14:05, 6 January 2014)
  216. BamUtil: polishBam‏‎ (14:06, 6 January 2014)
  217. BamUtil: mergeBam‏‎ (14:06, 6 January 2014)
  218. BamUtil: revert‏‎ (14:07, 6 January 2014)
  219. BamUtil: filter‏‎ (14:07, 6 January 2014)
  220. PhoneHome‏‎ (16:24, 6 January 2014)
  221. BamUtil: dumpHeader‏‎ (16:50, 6 January 2014)
  222. BamUtil: diff‏‎ (17:00, 6 January 2014)
  223. BamUtil: readIndexedBam‏‎ (17:48, 6 January 2014)
  224. BamUtil: dumpRefInfo‏‎ (17:54, 6 January 2014)
  225. BamUtil: dumpIndex‏‎ (18:01, 6 January 2014)
  226. BamUtil: readReference‏‎ (18:07, 6 January 2014)
  227. BamUtil: explainFlags‏‎ (19:01, 6 January 2014)
  228. Tutorial: EMMAX GotCloud STOM: Lecture 8‏‎ (02:31, 7 January 2014)
  229. Tutorial: GotCloud‏‎ (12:35, 10 January 2014)
  230. Code Sample: Generating Manhattan Plots in R‏‎ (10:49, 14 January 2014)
  231. UMAKE-glfSingle‏‎ (12:32, 22 January 2014)
  232. Ann Arbor Travel Basics‏‎ (15:16, 25 March 2014)
  233. BamUtil: squeeze‏‎ (11:58, 26 March 2014)
  234. RAREMETALWORKER X‏‎ (19:13, 27 March 2014)
  235. VerifyIDintensity‏‎ (15:34, 24 April 2014)
  236. Polymutt‏‎ (10:12, 27 April 2014)
  237. GotCloud: Source Releases‏‎ (17:34, 15 May 2014)
  238. Analyses of Indels‏‎ (18:12, 15 June 2014)
  239. Sequencing Workshop Analysis of Indels‏‎ (16:47, 16 June 2014)
  240. Introduction to new students‏‎ (21:39, 17 June 2014)
  241. FamRvTest command‏‎ (01:48, 14 July 2014)
  242. Abecasis Group Awards‏‎ (19:01, 23 July 2014)
  243. Sean Caron‏‎ (15:11, 31 July 2014)
  244. Ancestry‏‎ (14:53, 12 August 2014)
  245. FamLDCaller‏‎ (10:05, 18 August 2014)
  246. Biostatistics 830: Fall 2013 Edition‏‎ (13:59, 2 September 2014)
  247. VcfRefGen‏‎ (15:53, 4 September 2014)
  248. Xiaowei Zhan‏‎ (18:02, 4 September 2014)
  249. BamUtil: FAQ‏‎ (13:04, 23 September 2014)
  250. Debuggers‏‎ (14:33, 23 September 2014)

View (previous 250 | next 250) (20 | 50 | 100 | 250 | 500)

Retrieved from "http://genome.sph.umich.edu/wiki/Special:AncientPages"