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Jump to navigationJump to search- 01:31, 11 December 2017 diff hist 0 File:666.Worksheet 5.Solution.pdf Goncalo uploaded a new version of File:666.Worksheet 5.Solution.pdf current
- 10:16, 10 December 2017 diff hist +102 Biostatistics 666: Main Page →Problem Sets current
- 10:15, 10 December 2017 diff hist 0 N File:666.Worksheet 5.Solution.pdf
- 10:15, 10 December 2017 diff hist 0 N File:666.Worksheet 4.Solution.pdf current
- 03:57, 4 December 2017 diff hist +55 Biostatistics 666: Main Page →Sample Mid-Term
- 03:56, 4 December 2017 diff hist 0 N File:666.SampleMidterm02.pdf current
- 03:38, 4 December 2017 diff hist +19 Biostatistics 666: Introduction to De Novo Assembly →Slides current
- 03:37, 4 December 2017 diff hist -1 Biostatistics 666: Whole Genome Sequencing →Lecture Notes current
- 03:37, 4 December 2017 diff hist +18 Biostatistics 666: Main Page →Class Notes
- 03:35, 4 December 2017 diff hist 0 N File:666.2012.01 - De Novo Assembly.pdf current
- 03:34, 4 December 2017 diff hist 0 N File:666.2017.16 - Introduction to Sequencing.pdf current
- 09:28, 27 November 2017 diff hist +30 Biostatistics 666: Whole Genome Sequencing →Lecture Notes
- 09:28, 27 November 2017 diff hist +30 Biostatistics 666: Main Page →Class Notes
- 09:27, 27 November 2017 diff hist 0 N File:666.2017.16 - Introduction to Sequencing.pptx current
- 09:11, 20 November 2017 diff hist +45 Biostatistics 666: Main Page →Problem Sets
- 09:10, 20 November 2017 diff hist +22 Biostatistics 666: Genotype Imputation →Slides current
- 09:10, 20 November 2017 diff hist +22 Biostatistics 666: Main Page →Class Notes
- 09:09, 20 November 2017 diff hist 0 N File:666.2017.15 - Genotype Imputation.pdf current
- 09:08, 20 November 2017 diff hist 0 N File:666.Worksheet 5.pdf current
- 09:30, 15 November 2017 diff hist +25 Biostatistics 666: Linkage Analysis in Sibling Pairs →Slides current
- 09:30, 15 November 2017 diff hist +25 Biostatistics 666: Main Page →Class Notes
- 09:29, 15 November 2017 diff hist 0 N File:666.2017.14 - Affected Sibling Pairs.pdf current
- 09:38, 13 November 2017 diff hist +33 Biostatistics 666: Variance Component Analyses →Lecture Notes current
- 09:37, 13 November 2017 diff hist +33 Biostatistics 666: Main Page →Class Notes
- 09:36, 13 November 2017 diff hist 0 N File:666.2017.13 - Variance Component Models.pdf current
- 09:36, 13 November 2017 diff hist 0 File:666.2017.12 - Kinship Coefficients.pdf Goncalo uploaded a new version of File:666.2017.12 - Kinship Coefficients.pdf current
- 09:44, 8 November 2017 diff hist +112 Biostatistics 666: Main Page →Class Notes
- 09:43, 8 November 2017 diff hist 0 N File:666.2017.12 - Kinship Coefficients.pdf
- 08:59, 1 November 2017 diff hist 0 File:666.2010.01 - Power of Genomewide Studies.pdf Goncalo uploaded a new version of File:666.2010.01 - Power of Genomewide Studies.pdf current
- 04:28, 1 November 2017 diff hist +28 Biostatistics 666: Power of Genomewide Association Studies →Lecture Notes current
- 04:28, 1 November 2017 diff hist +34 Biostatistics 666: Main Page →Class Notes
- 04:27, 1 November 2017 diff hist 0 Biostatistics 666: Main Page →Class Notes
- 04:26, 1 November 2017 diff hist 0 N File:666.2010.01 - Power of Genomewide Studies.pdf
- 08:16, 23 October 2017 diff hist -9 Biostatistics 666: Advanced Haplotype Estimation →Slides current
- 08:15, 23 October 2017 diff hist +626 N Biostatistics 666: Advanced Haplotype Estimation Created page with "== Objective == This lecture introduces modern methods for haplotype estimation, which based on an idea introduced by Na Li and Matthew Stephens in 2003. This approach models..."
- 08:10, 23 October 2017 diff hist 0 N File:666.Worksheet 4.pdf current
- 08:10, 23 October 2017 diff hist +45 Biostatistics 666: Main Page →Problem Sets
- 08:04, 23 October 2017 diff hist +153 Biostatistics 666: Main Page →Problem Sets
- 08:03, 23 October 2017 diff hist 0 N File:666.Worksheet 3.Solution.pdf current
- 08:03, 23 October 2017 diff hist 0 N File:666.Worksheet 2.Solution.pdf current
- 08:02, 23 October 2017 diff hist 0 N File:666.Worksheet 1.Solution.pdf current
- 08:50, 11 October 2017 diff hist +109 Biostatistics 666: Main Page →Class Notes
- 08:49, 11 October 2017 diff hist 0 N File:666.2017.10 - Advanced Haplotyping.pdf current
- 08:37, 9 October 2017 diff hist +28 Biostatistics 666: Haplotype Estimation →Slides current
- 08:37, 9 October 2017 diff hist +6 Biostatistics 666: Main Page →Class Notes
- 08:36, 9 October 2017 diff hist +22 Biostatistics 666: Main Page →Class Notes
- 08:36, 9 October 2017 diff hist 0 N File:666.2017.09 - Haplotype Estimation.pdf current
- 15:53, 6 October 2017 diff hist +45 Biostatistics 666: Main Page →Problem Sets
- 02:42, 5 October 2017 diff hist +8 Biostatistics 666: Main Page →Course History
- 08:34, 4 October 2017 diff hist +1 Biostatistics 666: Main Page →Sample MidTerm
- 08:34, 4 October 2017 diff hist 0 Biostatistics 666: Main Page →Sample MidTerm
- 08:34, 4 October 2017 diff hist +71 Biostatistics 666: Main Page →Problem Sets
- 08:33, 4 October 2017 diff hist 0 N File:666.SampleMidterm.pdf current
- 07:12, 4 October 2017 diff hist +25 Biostatistics 666: Introduction to the E-M Algorithm →Slides current
- 07:11, 4 October 2017 diff hist +25 Biostatistics 666: Main Page →Class Notes
- 07:10, 4 October 2017 diff hist 0 N File:666.2017.08 - The E-M Algorithm.pdf current
- 07:08, 4 October 2017 diff hist 0 N File:666.Worksheet 3.pdf current
- 06:52, 2 October 2017 diff hist -134 Biostatistics 666: Maximum Likelihood Allele Frequency Estimation →Slides current
- 06:50, 2 October 2017 diff hist +37 Biostatistics 666: Main Page →Class Notes
- 06:48, 2 October 2017 diff hist 0 N File:666.2017.07 - Maximum Likelihood Estimation.pdf current
- 06:20, 2 October 2017 diff hist +46 Biostatistics 666: Modeling Recombination and Migration in the Coalescent →Slides current
- 08:26, 27 September 2017 diff hist +39 Biostatistics 666: Main Page →Class Notes
- 08:25, 27 September 2017 diff hist +45 Biostatistics 666: Main Page →Problem Sets
- 08:24, 27 September 2017 diff hist 0 N File:666.2017.06 - More Advanced Coalescent Models.pdf current
- 08:23, 27 September 2017 diff hist 0 File:666.Worksheet 2.pdf Goncalo uploaded a new version of File:666.Worksheet 2.pdf current
- 08:23, 27 September 2017 diff hist 0 N File:666.Worksheet 2.pdf
- 08:27, 25 September 2017 diff hist +36 Biostatistics 666: Main Page →Class Notes
- 08:26, 25 September 2017 diff hist +36 Biostatistics 666: Modeling Variation in the Coalescent →Slides current
- 08:25, 25 September 2017 diff hist 0 N File:666.2017.05 - Coalescent and Allele Counts.pdf current
- 09:06, 22 September 2017 diff hist +75 N Talk:Biostatistics 666: Main Page Started discussion page to track future ideas for class current
- 05:55, 18 September 2017 diff hist +17 Biostatistics 666: Introduction to the Coalescent →Slides current
- 05:54, 18 September 2017 diff hist +17 Biostatistics 666: Main Page →Class Notes
- 05:53, 18 September 2017 diff hist 0 N File:666.04 - The Coalescent.pdf current
- 07:58, 13 September 2017 diff hist +1 Biostatistics 666: Main Page →Problem Sets
- 07:58, 13 September 2017 diff hist +5 Biostatistics 666: Main Page →Problem Sets
- 07:58, 13 September 2017 diff hist -12 Biostatistics 666: Main Page →Problem Sets
- 07:57, 13 September 2017 diff hist 0 N File:666.Worksheet 1.pdf current
- 07:57, 13 September 2017 diff hist +71 Biostatistics 666: Main Page →Office Hours
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- 07:53, 13 September 2017 diff hist -39 Biostatistics 666: Linkage Disequilibrium →Slides current
- 07:53, 13 September 2017 diff hist +68 Biostatistics 666: Linkage Disequilibrium →Slides
- 07:53, 13 September 2017 diff hist +30 Biostatistics 666: Main Page →Class Notes
- 07:51, 13 September 2017 diff hist 0 N File:666.2017.03 - Linkage Disequilibrium.pdf current
- 09:46, 12 September 2017 diff hist -73 Biostatistics 666: Main Page →Scheduling
- 08:33, 11 September 2017 diff hist +52 Biostatistics 666: Main Page →Class Notes
- 08:32, 11 September 2017 diff hist +38 Biostatistics 666: Contemporary Human Genetics →Slides current
- 08:32, 11 September 2017 diff hist +38 Biostatistics 666: Main Page →Class Notes
- 08:32, 11 September 2017 diff hist 0 N File:666.2017.01 - Introductory Lecture.pdf current
- 08:30, 11 September 2017 diff hist +73 Biostatistics 666: Hardy-Weinberg Equilibrium →Slides current
- 08:29, 11 September 2017 diff hist +72 Biostatistics 666: Main Page →Older Lectures
- 08:29, 11 September 2017 diff hist -38 Biostatistics 666: Main Page →Class Notes
- 08:27, 11 September 2017 diff hist +950 N Biostatistics 666: Contemporary Human Genetics Created page with "== Objective == This lecture introduces course objectives, which are to provide students with a working understanding of the techniques commonly used by statistical geneticis..."
- 08:26, 11 September 2017 diff hist +69 Biostatistics 666: Main Page →Class Notes
- 08:23, 11 September 2017 diff hist +107 Biostatistics 666: Main Page →Older Lectures
- 08:23, 11 September 2017 diff hist +43 Biostatistics 666: Main Page →Class Notes
- 08:23, 11 September 2017 diff hist -150 Biostatistics 666: Main Page →Older Lectures
- 04:44, 11 September 2017 diff hist 0 N File:666.2017.02 - Hardy Weinberg Equilibrium.pdf current
- 02:47, 5 July 2017 diff hist 0 Abecasis Lab →Former Research Fellows
- 08:40, 11 April 2017 diff hist +146 Biostatistics 866: Main Page →Class Worksheets
- 08:39, 11 April 2017 diff hist 0 N File:2017.04 - Adventures in Human Genetics.pdf current
- 08:10, 25 March 2017 diff hist +60 Biostatistics 866: Main Page →Association Analysis
- 08:10, 25 March 2017 diff hist 0 N File:Question Sheet - 2017 - Liu et al (2013) Nature Genetics.pdf current
- 08:08, 25 March 2017 diff hist +100 Biostatistics 866: Main Page →Association Analysis
- 08:07, 25 March 2017 diff hist 0 N File:Question Sheet - 2017 - Wu et al (2011) American Journal of Human Genetics.pdf current
- 19:14, 19 March 2017 diff hist -54 Biostatistics 866: Main Page →Planned Reading
- 19:13, 19 March 2017 diff hist +189 Biostatistics 866: Main Page →Short Read Sequencing
- 19:10, 19 March 2017 diff hist +45 N File:Question Sheet - 2017 - Kang et al (2010) Nature Genetics .pdf Introduction to linear mixed models for GWAS. current
- 07:37, 13 February 2017 diff hist +464 Biostatistics 866: Main Page →Class Worksheets
- 10:52, 30 January 2017 diff hist +131 Biostatistics 866: Main Page →Planned Reading
- 10:51, 30 January 2017 diff hist +104 Biostatistics 866: Main Page →Class Worksheets
- 10:50, 30 January 2017 diff hist 0 N File:Question Sheet - Boehnke and Cox (1997) AJHG.pdf current
- 12:34, 25 January 2017 diff hist +49 Minimac: Tutorial →Imputation into Phased Haplotypes - minimac(2) current
- 09:58, 25 January 2017 diff hist 0 N File:01. Genotype Imputation.pdf current
- 09:58, 25 January 2017 diff hist 0 N File:00. Warm-up to Genomewide Analyses.pdf current
- 09:36, 19 January 2017 diff hist +1 Biostatistics 866: Main Page →Class Worksheets
- 09:36, 19 January 2017 diff hist +76 Biostatistics 866: Main Page →Class Worksheets
- 09:35, 19 January 2017 diff hist 0 N File:866 - Slides for Hyun.pdf current
- 09:24, 19 January 2017 diff hist +17 830 - MarkovModel::WalkLeft() current
- 09:05, 19 January 2017 diff hist +6 Biostatistics 866: Main Page →Class Worksheets
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- 09:04, 19 January 2017 diff hist 0 N File:Question Sheet - Delaneau et al (2013) Nature Methods.pdf current
- 07:36, 10 January 2017 diff hist +101 Biostatistics 866: Main Page →Class Worksheets
- 16:36, 6 January 2017 diff hist -2 Biostatistics 866: Main Page →Class Worksheets
- 16:36, 6 January 2017 diff hist +42 N 866 Redirected page to Biostatistics 866: Main Page current
- 04:45, 5 January 2017 diff hist +79 Biostatistics 866: Main Page →Class Worksheets
- 04:33, 5 January 2017 diff hist +167 Biostatistics 866: Main Page →Planned Reading
- 04:31, 5 January 2017 diff hist +164 Biostatistics 866: Main Page →Planned Reading
- 04:23, 5 January 2017 diff hist +22 Biostatistics 866: Main Page →Scheduling
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- 16:32, 15 December 2016 diff hist +171 Biostatistics 866: Main Page
- 19:11, 1 December 2016 diff hist 0 Biostatistics 866: Main Page →Scheduling
- 19:11, 1 December 2016 diff hist +39 MediaWiki:Sidebar
- 19:09, 1 December 2016 diff hist +42 N Biostatistics 866 Redirected page to Biostatistics 866: Main Page current
- 19:08, 1 December 2016 diff hist +2,396 N Biostatistics 866: Core Competencies Created page with "The Council for Education in Public Health recommends that every course document the Public Health competencies covered in its syllabus. This is the list of competencies cover..." current
- 20:04, 29 November 2016 diff hist +267 Biostatistics 866: Main Page →Planned Reading
- 20:01, 29 November 2016 diff hist +727 Biostatistics 866: Main Page →Planned Reading
- 19:56, 29 November 2016 diff hist +183 Biostatistics 866: Main Page →Planned Reading
- 19:54, 29 November 2016 diff hist +5,600 N Biostatistics 866: Main Page Created page with "== Objective == Gene mapping studies study the relationship between genetic variation and susceptibility to human disease. These studies are changing rapidly with the availab..."
- 11:14, 28 January 2016 diff hist +159 N Imputation Server: Example Created page with "There is no imputation server example yet, but there is an imputation server example file. It is here: Sample Input File" current
- 11:12, 28 January 2016 diff hist 0 N File:Chr20.1000G.EUR.330k.vcf.gz current
- 03:00, 28 January 2016 diff hist -28 SeqShop: Sequence Mapping and Assembly Practical, May 2015 →Logging Off current
- 02:57, 28 January 2016 diff hist -13 SeqShop: Sequence Mapping and Assembly Practical, May 2015 →Download & Build GotCloud
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- 02:54, 28 January 2016 diff hist -19 SeqShop: Sequence Mapping and Assembly Practical, May 2015 →Setup
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- 12:13, 15 January 2016 diff hist +165 Abecasis Lab →Former Research Fellows
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- 16:10, 10 July 2015 diff hist +417 Biostatistics 501: Main Page →Textbook current
- 16:03, 10 July 2015 diff hist +6 Biostatistics 501: Main Page →Textbook
- 16:02, 10 July 2015 diff hist +140 Biostatistics 501: Main Page →Scheduling
- 15:37, 10 July 2015 diff hist -114 Biostatistics 501: Main Page
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- 15:35, 10 July 2015 diff hist +854 Biostatistics 501: Main Page →Useful Resources
- 15:26, 10 July 2015 diff hist -1 Biostatistics 501: Main Page →Target Audience
- 15:25, 10 July 2015 diff hist +2,152 N Biostatistics 501: Main Page Created page with "== Objective == Biostatistics helps us design useful studies and interpret the data we collect. Biostatistics 501 is an introductory Masters level course that introduces stud..."
- 15:20, 10 July 2015 diff hist +8 501 Redirected page to Biostatistics 501: Main Page current
- 15:19, 10 July 2015 diff hist +34 N 501 Created page with "#REDIRECT [BIOSTAT 501: Main Page]"
- 00:42, 22 May 2015 diff hist +166 Abecasis Lab →Former Research Fellows
- 00:41, 22 May 2015 diff hist -33 Abecasis Lab →Research Fellows
- 17:59, 23 April 2015 diff hist -9 Minimac2 →Download
- 16:44, 4 February 2015 diff hist +354 Class Notes →BIOSTAT 615 / 815 Statistical Computing current
- 16:42, 4 February 2015 diff hist -1 Main Page →Projects
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- 01:04, 31 January 2015 diff hist +86 NHLBI Informatics Resource current
- 01:02, 31 January 2015 diff hist 0 NHLBI Informatics Resource →Key Technologies
- 01:00, 31 January 2015 diff hist +982 NHLBI Informatics Resource →Key Individuals
- 00:47, 31 January 2015 diff hist +66 NHLBI Informatics Resource →Key Individuals
- 00:45, 31 January 2015 diff hist +1,180 N NHLBI Informatics Resource Created page with "The '''Informatics Resource Core''' provides advice to participating studies, sequencing centers and staff at the National Institutes of Health on the handling, processing and..."
- 23:15, 29 January 2015 diff hist -8 Minimac3 Imputation Cookbook →Download
- 23:14, 29 January 2015 diff hist -82 Minimac3 Imputation Cookbook →Download Reference Panel
- 18:44, 29 January 2015 diff hist -431 Minimac3
- 13:07, 12 December 2014 diff hist +1 SeqShop: December 2014
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- 13:05, 12 December 2014 diff hist 0 N File:2014.12 - Workshop Closing.pdf current
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- 05:27, 8 December 2014 diff hist 0 N File:2014.12 - Workshop Introduction.pdf current
- 05:17, 8 December 2014 diff hist +65 Biostatistics 830: Main Page →Class Worksheets
- 05:16, 8 December 2014 diff hist 0 N File:Question Sheet - Kang et al (2010) Nature Genetics.pdf current
- 14:46, 3 December 2014 diff hist -15 LocusZoom Standalone 1.2 Redirected page to LocusZoom Standalone current
- 14:45, 3 December 2014 diff hist +22 Polymutt: a tool for calling polymorphism and de novo mutations in families for sequencing data Redirected page to Polymutt current
- 13:41, 3 December 2014 diff hist +32 Biostatistics 830: Main Page →Class Worksheets
- 03:41, 1 December 2014 diff hist +64 Biostatistics 830: Main Page →Class Worksheets
- 03:41, 1 December 2014 diff hist 0 File:Question Sheet - Liu et al (2013) Nature Genetics.pdf Goncalo uploaded a new version of "File:Question Sheet - Liu et al (2013) Nature Genetics.pdf": Update with volume and page numbers. current
- 05:19, 24 November 2014 diff hist +31 Biostatistics 830: Main Page →Class Worksheets
- 04:28, 24 November 2014 diff hist +68 Biostatistics 830: Main Page →Class Worksheets
- 04:28, 24 November 2014 diff hist 0 N File:Question Sheet - Kircher et al (2014) Nature Genetics.pdf current
- 04:27, 24 November 2014 diff hist +67 Biostatistics 830: Main Page →Class Worksheets
- 04:27, 24 November 2014 diff hist 0 N File:Question Sheet - Albers et al (2010) Genome Research.pdf current
- 15:37, 11 November 2014 diff hist +21 Biostatistics 830: Main Page →Class Worksheets
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- 19:29, 26 October 2014 diff hist 0 File:Question Sheet - Iqbal et al (2012) Nature Genetics.pdf Goncalo uploaded a new version of "File:Question Sheet - Iqbal et al (2012) Nature Genetics.pdf": Removed dependency on Zerbino and Birney (Velvet) paper, so as to allow more flexibility in scheduling. current
- 19:22, 26 October 2014 diff hist +45 Biostatistics 830: Main Page →Class Worksheets
- 00:29, 20 October 2014 diff hist 0 Abecasis Lab →Former Doctoral Students
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- 13:56, 22 September 2014 diff hist 0 Biostatistics 830: Main Page →Class Worksheets
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- 21:09, 18 September 2014 diff hist 0 N File:Question Sheet - Menelaou et al (2013) Bioinformatics.pdf current
- 21:08, 18 September 2014 diff hist +517 Biostatistics 830: Main Page →Class Worksheets
- 15:18, 15 September 2014 diff hist +125 Biostatistics 830: Main Page →Scheduling
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- 15:12, 9 September 2014 diff hist +178 Biostatistics 830: Main Page →Required Reading
- 18:02, 4 September 2014 diff hist +1 Xiaowei Zhan current
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- 17:59, 4 September 2014 diff hist +100 ChunkChromosome
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- 15:49, 2 September 2014 diff hist 0 Biostatistics 830: Main Page →Required Reading
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- 14:49, 2 September 2014 diff hist +101 Biostatistics 830: Main Page →Required Reading
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- 14:35, 2 September 2014 diff hist +227 Biostatistics 830: Main Page →Required Reading
- 14:34, 2 September 2014 diff hist +531 Biostatistics 830: Main Page →Required Reading
- 14:04, 2 September 2014 diff hist -3,830 Biostatistics 830: Main Page
- 13:59, 2 September 2014 diff hist +8,505 N Biostatistics 830: Fall 2013 Edition Created page with "This is an archive of the Biostatistics 830 class page, as taught in the Fall of 2013. For the current edition of the course see Biostatistics 830: Main Page. == Objectiv..." current
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- 10:32, 25 April 2014 diff hist +256 Abecasis Lab →Alumni
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- 10:02, 27 March 2014 diff hist -95 RAREMETALWORKER METHOD →Single Variant Score Tests
- 09:58, 27 March 2014 diff hist +167 RAREMETALWORKER METHOD →Single Variant Score Tests
- 09:56, 27 March 2014 diff hist 0 RAREMETALWORKER METHOD
- 09:56, 27 March 2014 diff hist -101 RAREMETALWORKER METHOD →Brief Introduction
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- 17:22, 31 January 2014 diff hist +64 Abecasis Lab →Former Staff
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- 17:20, 31 January 2014 diff hist +22 Abecasis Lab →Former Masters Students
- 17:18, 31 January 2014 diff hist +150 Abecasis Lab →Former Research Fellows
- 17:17, 31 January 2014 diff hist -18 Abecasis Lab →Research Fellows
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- 17:15, 31 January 2014 diff hist +14 Abecasis Lab →Former Masters Students
- 16:48, 29 January 2014 diff hist +1 Tutorial: RAREMETAL →STEP 3: Run RAREMETAL for Meta-Analysis
- 16:48, 29 January 2014 diff hist +1 Tutorial: RAREMETAL →STEP 2: Analyze individual samples using RAREMETALWORKER
- 16:47, 29 January 2014 diff hist +17 Tutorial: RAREMETAL →STEP 3: Run RAREMETAL for Meta-Analysis
- 16:44, 29 January 2014 diff hist +1 Tutorial: RAREMETAL →STEP 2: Analyze individual samples using RAREMETALWORKER
- 09:51, 29 January 2014 diff hist 0 Minimac →using a MaCH reference panel