Page history
10 July 2014
9 July 2014
→Improvements
+16
→Running GotCloud Genotype Refinement
+183
→Genotype Refinement Output
-175
→GotCloud BAM Index File
+6
→Setup when running on your own outside of the SeqShop Workshop
-979
26 June 2014
→Run GotCloud SnpCall
+777
no edit summary
-1
→Did I find interesting variants?
+19
→Running GotCloud Genotype Refinement
+36
→Genotype Refinement Input
+1
→Passing SNPs
+42
→Filtered VCF
+68
→Run GotCloud SnpCall
+36
→Examining GotCloud SnpCall Input files
+209
no edit summary
+1,822
17 June 2014
no edit summary
+284
→Improvements
→diff
+1,203
no edit summary
+207
→Run GotCloud SnpCall
+167
→Did I find interesting variants?
+135
→Did I find interesting variants?
+915
→Did I find interesting variants?
+15
→Genotype Refinement Output
+529
16 June 2014
→Filtering Summary Statistics
+9
→Filtering Summary Statistics
+116
→Genotype Refinement Input
+218
→Filtering Summary Statistics
-11
→Examining GotCloud SnpCall Input files
+20
→Reference Files
+41
→Reference Files
+370
→Setup your run environment
+25
→Setup your run environment
+91
15 June 2014
→GotCloud BAM Index File
-4
→Sequnce Alignment Files: BAM Files
+159
→Genotype Refinement Output
+267
→Genotype Refinement Output
+1,277
no edit summary
+119
→Genotype Refinement Output
-82
→Comparing the refined genotypes to the unrefined genotypes
+12
→Genotype Refinement Output
+70
→GotCloud Genotype Refinement
+1,458
→Filtered VCF
→Passing SNPs
+1
→Examining GotCloud SnpCall Output
+1,241
→Filtered VCF
+466
→Filtered VCF
+41
→Filtered VCF
+30
→Examining GotCloud SnpCall Output
+1,456
