SeqShop: June 2014

Sequence Analysis Workshop June 16-20, 2014: http://seqshop.sph.umich.edu/

Note: new versions of these practicals are available at: SeqShop: December 2014

• The ones here are the original ones from the June workshop (updated to be run from elsewhere)

Monday Lecture	Practical
Design of Human Genetic Studies	Interacting with Sequence Data
Sequence Mapping and Assembly	SeqShop: Sequence Mapping and Assembly Practical, June 2014
Tuesday Lecture	Practical
Variant Calling and Filtering for SNPs	SeqShop: Variant Calling and Filtering for SNPs Practical, June 2014
Variant Calling and Filtering for INDELs	SeqShop: Variant Calling and Filtering for INDELs Practical, June 2014
Wednesday Lecture	Practical
Analysis of Structural Variation - Part 1 Analysis of Structural Variation - Part 2	SeqShop: Analysis of Structural Variation Practical, June 2014 SeqShop: Aligning Your Own Genome, June 2014
Thursday Lecture	Practical
Estimates of Genetic Ancestry	SeqShop: Estimates of Genetic Ancestry Practical, June 2014
Genetic Association Analysis	SeqShop: Genetic Association Analysis Practical, June 2014
Friday Lecture	Practical
Example of a Whole Genome Association Study	SeqShop: Friday - Practicing what we learned, June 2014