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  1. RAREMETAL Documentation‏‎ (444 revisions)
  2. RAREMETALWORKER‏‎ (429 revisions)
  3. Vt‏‎ (422 revisions)
  4. TrioCaller‏‎ (211 revisions)
  5. Minimac‏‎ (200 revisions)
  6. Variant Normalization‏‎ (192 revisions)
  7. Abecasis Lab‏‎ (191 revisions)
  8. Biostatistics 615/815 Fall 2011‏‎ (176 revisions)
  9. LocusZoom Standalone‏‎ (162 revisions)
  10. EPACTS for DIAGRAM‏‎ (158 revisions)
  11. RAREMETAL DOWNLOAD & BUILD‏‎ (152 revisions)
  12. RareMETALS‏‎ (147 revisions)
  13. Biostatistics 666: Main Page‏‎ (146 revisions)
  14. Tutorial: Low Pass Sequence Analysis‏‎ (145 revisions)
  15. RAREMETALWORKER METHOD‏‎ (142 revisions)
  16. Minimac3‏‎ (137 revisions)
  17. Tutorial: GotCloud‏‎ (125 revisions)
  18. Polymutt‏‎ (124 revisions)
  19. RAREMETAL METHOD‏‎ (123 revisions)
  20. Famrvtest‏‎ (122 revisions)
  21. Minimac: 1000 Genomes Imputation Cookbook‏‎ (118 revisions)
  22. EPACTS‏‎ (117 revisions)
  23. Main Page‏‎ (117 revisions)
  24. MaCH‏‎ (114 revisions)
  25. BamUtil‏‎ (111 revisions)
  26. SeqShop: Sequence Mapping and Assembly Practical, June 2014‏‎ (106 revisions)
  27. Variant classification‏‎ (103 revisions)
  28. Relationship between Ploidy, Alleles and Genotypes‏‎ (103 revisions)
  29. QPLOT‏‎ (102 revisions)
  30. GotCloud‏‎ (101 revisions)
  31. EMADS‏‎ (97 revisions)
  32. Tutorial: RAREMETAL‏‎ (95 revisions)
  33. EMADS Primary Analysis Plan‏‎ (92 revisions)
  34. GotCloud: Binary Releases‏‎ (82 revisions)
  35. VcfCodingSnps‏‎ (82 revisions)
  36. Software‏‎ (81 revisions)
  37. SeqShop: Variant Calling and Filtering for SNPs Practical, June 2014‏‎ (81 revisions)
  38. DosageConvertor‏‎ (80 revisions)
  39. VerifyBamID‏‎ (73 revisions)
  40. GotCloud: Variant Calling Pipeline‏‎ (72 revisions)
  41. GREGOR‏‎ (72 revisions)
  42. Biostatistics 602: Main Page‏‎ (71 revisions)
  43. LibStatGen: BAM‏‎ (70 revisions)
  44. SeqShop: Calling Your Own Genome, December 2014‏‎ (69 revisions)
  45. Triodenovo‏‎ (67 revisions)
  46. Exome Chip Design‏‎ (66 revisions)
  47. LocusZoom‏‎ (63 revisions)
  48. Biostatistics 615/815: Main Page‏‎ (63 revisions)
  49. Biostatistics 830: Main Page‏‎ (62 revisions)
  50. SeqShop: Estimates of Genetic Ancestry Practical, June 2014‏‎ (61 revisions)
  51. SeqShop: Analysis of Structural Variation Practical, June 2014‏‎ (61 revisions)
  52. SardiNIA‏‎ (60 revisions)
  53. METAL Documentation‏‎ (59 revisions)
  54. RAREMETAL‏‎ (57 revisions)
  55. LASER‏‎ (57 revisions)
  56. FastQValidator‏‎ (56 revisions)
  57. SeqShop: Calling Your Own Genome, May 2015‏‎ (56 revisions)
  58. RareMETALS2‏‎ (55 revisions)
  59. GotCloud: Genetic Reference and Resource Files‏‎ (55 revisions)
  60. Arf‏‎ (53 revisions)
  61. LibStatGen: FASTQ‏‎ (52 revisions)
  62. Creating an AMI on EC2‏‎ (51 revisions)
  63. C++ Library: libStatGen‏‎ (50 revisions)
  64. FTEC‏‎ (50 revisions)
  65. SeqShop: May 2015‏‎ (50 revisions)
  66. MaCH FAQ‏‎ (49 revisions)
  67. GotCloud: Alignment Pipeline‏‎ (49 revisions)
  68. Shuang Feng‏‎ (47 revisions)
  69. Minimac2‏‎ (47 revisions)
  70. RAREMETAL Command Reference‏‎ (46 revisions)
  71. Sequencing Workshop Analysis of Indels‏‎ (46 revisions)
  72. LibStatGen Download‏‎ (44 revisions)
  73. Test EPACTS for DIAGRAM‏‎ (43 revisions)
  74. Thunder‏‎ (43 revisions)
  75. RAREMETAL Change Log‏‎ (43 revisions)
  76. Karma-colorspace‏‎ (43 revisions)
  77. BamGenotypeCheck‏‎ (42 revisions)
  78. Minimac3 Usage‏‎ (42 revisions)
  79. StarCluster‏‎ (42 revisions)
  80. Minimac4‏‎ (41 revisions)
  81. Amazon Snapshot‏‎ (40 revisions)
  82. SeqShop: Ancestry On Your Own Genome, December 2014‏‎ (40 revisions)
  83. C++ Class: SamFile‏‎ (40 revisions)
  84. METAL Quick Start‏‎ (39 revisions)
  85. UMAKE‏‎ (39 revisions)
  86. GotCloud: Alignment Sub-Pipelines‏‎ (38 revisions)
  87. Sequence Analysis Practice 2011/03/09‏‎ (38 revisions)
  88. Karma‏‎ (37 revisions)
  89. SeqShop: Analysis of Structural Variation Practical, December 2014‏‎ (37 revisions)
  90. SeqShop: Sequence Mapping and Assembly Practical, December 2014‏‎ (36 revisions)
  91. Vmatch‏‎ (35 revisions)
  92. SeqShop: Variant Calling and Filtering for INDELs Practical, June 2014‏‎ (35 revisions)
  93. Analyses of Indels‏‎ (34 revisions)
  94. RAREMETALWORKER command reference‏‎ (34 revisions)
  95. SeqShop: Estimates of Genetic Ancestry Practical, December 2014‏‎ (34 revisions)
  96. SeqShop: December 2014‏‎ (34 revisions)
  97. BamUtil: dedup‏‎ (34 revisions)
  98. Minimac3 Imputation Cookbook‏‎ (33 revisions)
  99. SAM Validation Criteria‏‎ (33 revisions)
  100. Make file tutorial‏‎ (33 revisions)
  101. SEQMIX‏‎ (33 revisions)
  102. Minimac3 Info File‏‎ (33 revisions)
  103. Biostatistics 866: Main Page‏‎ (33 revisions)
  104. SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014‏‎ (33 revisions)
  105. RAREMETALWORKER SPECIAL TOPICS‏‎ (33 revisions)
  106. GTDT‏‎ (32 revisions)
  107. Releasing GotCloud‏‎ (32 revisions)
  108. SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014‏‎ (31 revisions)
  109. RAREMETAL FAQ‏‎ (31 revisions)
  110. Abecasis Group Awards‏‎ (31 revisions)
  111. Polymutt2‏‎ (30 revisions)
  112. BamUtil: recab‏‎ (30 revisions)
  113. RAREFY COMMAND‏‎ (30 revisions)
  114. Biostatistics 830 - Code Snippets‏‎ (30 revisions)
  115. RAREFY DOCUMENTATION‏‎ (29 revisions)
  116. IMPUTE2: 1000 Genomes Imputation Cookbook‏‎ (29 revisions)
  117. CSG Tech Talks‏‎ (29 revisions)
  118. C++ Class: CigarRoller‏‎ (29 revisions)
  119. ExomePicks‏‎ (28 revisions)
  120. BamUtil: validate‏‎ (28 revisions)
  121. Raremetal Incoming updates‏‎ (28 revisions)
  122. BamUtil: convert‏‎ (27 revisions)
  123. BAM Review Action Items‏‎ (27 revisions)
  124. Minimac3 ChangeLog‏‎ (27 revisions)
  125. SAM‏‎ (27 revisions)
  126. BamUtil: stats‏‎ (26 revisions)
  127. GotCloud: Amazon Demo‏‎ (26 revisions)
  128. SeqShop: Genetic Association Analysis Practical, June 2014‏‎ (26 revisions)
  129. BamUtil: bam2FastQ‏‎ (26 revisions)
  130. Using Git Example‏‎ (25 revisions)
  131. BamUtil: clipOverlap‏‎ (25 revisions)
  132. SeqShop: June 2014‏‎ (25 revisions)
  133. M3vcftools Usage‏‎ (25 revisions)
  134. GotCloud: Versions‏‎ (24 revisions)
  135. EMMAX‏‎ (23 revisions)
  136. MutationFilter‏‎ (23 revisions)
  137. Minimac: Tutorial‏‎ (22 revisions)
  138. SeqShop: Genetic Association Analysis Practical, December 2014‏‎ (22 revisions)
  139. BamUtil: trimBam‏‎ (22 revisions)
  140. Bar Harbor Statistical Genetics Workshop‏‎ (22 revisions)
  141. Generic Exome Analysis Plan‏‎ (22 revisions)
  142. Introduction to new students‏‎ (21 revisions)
  143. SeqShop: Analysis of Structural Variation Practical, May 2015‏‎ (20 revisions)
  144. C++ Class: SamFileHeader‏‎ (20 revisions)
  145. C++ Library: general Change Log‏‎ (20 revisions)
  146. Tutorial: GotCloud UW CMG‏‎ (20 revisions)
  147. SeqShop: Ancestry On Your Own Genome, June 2014‏‎ (20 revisions)
  148. C++ Class: SamRecord‏‎ (20 revisions)
  149. Creating a Snapshot on EC2‏‎ (20 revisions)
  150. Amazon Storage‏‎ (20 revisions)
  151. GotCloud: Source Releases‏‎ (19 revisions)
  152. Tutorial: Low Pass Sequence Analysis Answers‏‎ (19 revisions)
  153. GlfSingle‏‎ (19 revisions)
  154. VcfCooker‏‎ (19 revisions)
  155. Tutorial: EMMAX GotCloud STOM‏‎ (19 revisions)
  156. RvTests‏‎ (19 revisions)
  157. SeqShop: Aligning Your Own Genome, December 2014‏‎ (19 revisions)
  158. Tandem Repeat Concepts‏‎ (19 revisions)
  159. VICES‏‎ (19 revisions)
  160. Bam read count‏‎ (18 revisions)
  161. SeqShop: Ancestry On Your Own Genome, May 2015‏‎ (18 revisions)
  162. GotCloud: FAQs‏‎ (18 revisions)
  163. LibStatGen: general‏‎ (17 revisions)
  164. MEAGA‏‎ (17 revisions)
  165. Minimac Command Reference‏‎ (17 revisions)
  166. GotCloud: Variant Calling Options‏‎ (17 revisions)
  167. BamUtil: filter‏‎ (17 revisions)
  168. C++ Class: InputFile‏‎ (17 revisions)
  169. SeqShop: Sequence Mapping and Assembly Practical, May 2015‏‎ (17 revisions)
  170. LibStatGen Repository‏‎ (17 revisions)
  171. GlfTrio‏‎ (17 revisions)
  172. Evaluating a Read Mapper on Simulated Data‏‎ (17 revisions)
  173. Minimac3 Info (Older Version)‏‎ (17 revisions)
  174. FamLDCaller‏‎ (17 revisions)
  175. RAREFY‏‎ (17 revisions)
  176. ChunkChromosome‏‎ (16 revisions)
  177. SeqShop: Aligning Your Own Genome, June 2014‏‎ (16 revisions)
  178. LibStatGen: ASP‏‎ (16 revisions)
  179. VcfRefGen‏‎ (16 revisions)
  180. LibStatGen: VCF‏‎ (15 revisions)
  181. C++ Library: FASTQ Change Log‏‎ (15 revisions)
  182. BamUtil: mergeBam‏‎ (15 revisions)
  183. GlfMultiples‏‎ (15 revisions)
  184. SeqShop: Calling Your Own Genome, June 2014‏‎ (15 revisions)
  185. METAL‏‎ (15 revisions)
  186. Short Workshops‏‎ (15 revisions)
  187. How To Use Git‏‎ (14 revisions)
  188. SardiNIA project meeting July 15-16, 2013‏‎ (14 revisions)
  189. Minimac3 Cookbook : Chromosome X Imputation‏‎ (13 revisions)
  190. M3vcftools‏‎ (13 revisions)
  191. Genezoom‏‎ (13 revisions)
  192. Mach DAC‏‎ (13 revisions)
  193. SeqShop: Variant Calling and Filtering for SNPs Practical, May 2015‏‎ (13 revisions)
  194. Git FAQs‏‎ (13 revisions)
  195. GotCloud: GenomeSTRiP Pipeline‏‎ (13 revisions)
  196. METAL Command Reference‏‎ (13 revisions)
  197. CalcMatch‏‎ (13 revisions)
  198. MaCH: machX‏‎ (13 revisions)
  199. BamUtil: writeRegion‏‎ (12 revisions)
  200. GLF‏‎ (12 revisions)
  201. GotCloud: Creating a New Pipeline‏‎ (12 revisions)
  202. Minimac3 Examples‏‎ (12 revisions)
  203. RAREFY DOWNLOAD‏‎ (12 revisions)
  204. RelativeFinder‏‎ (12 revisions)
  205. MaCH: Input Files‏‎ (12 revisions)
  206. SAM/BAM Classes FAQs‏‎ (12 revisions)
  207. LiftOver‏‎ (12 revisions)
  208. Base Caller Summaries‏‎ (12 revisions)
  209. LibStatGen Troubleshooting‏‎ (11 revisions)
  210. RAREFY TUTORIAL‏‎ (11 revisions)
  211. Sean Caron‏‎ (11 revisions)
  212. Class Notes‏‎ (11 revisions)
  213. Tutorial: EMMAX GotCloud STOM: Lecture 8‏‎ (11 revisions)
  214. Verifying Sample Identities - Implementation‏‎ (11 revisions)
  215. SAV File Format‏‎ (11 revisions)
  216. BamUtil: diff‏‎ (11 revisions)
  217. MaCH: 1000 Genomes Imputation Cookbook‏‎ (11 revisions)
  218. SeqShop: Variant Calling and Filtering for INDELs Practical, May 2015‏‎ (11 revisions)
  219. Sam Library Usage Examples‏‎ (10 revisions)
  220. BamUtil: polishBam‏‎ (10 revisions)
  221. Biostatistics 666: Linkage Disequilibrium‏‎ (10 revisions)
  222. UMAKE-glfSingle‏‎ (10 revisions)
  223. LibStatGen: GLF‏‎ (10 revisions)
  224. Trial Enrichment‏‎ (10 revisions)
  225. Amazon Single Node‏‎ (10 revisions)
  226. 1000 Genomes Project Pilot 1 SNP Calling‏‎ (10 revisions)
  227. Minimac4 - Full List of Options‏‎ (10 revisions)
  228. C++ Class: FastQFile‏‎ (10 revisions)
  229. Haploxt‏‎ (10 revisions)
  230. Rare variant tests‏‎ (9 revisions)
  231. BAFRegress‏‎ (9 revisions)
  232. GotCloud: Amazon‏‎ (9 revisions)
  233. Dajiang Liu‏‎ (9 revisions)
  234. Goncalo Abecasis‏‎ (9 revisions)
  235. Regions of high linkage disequilibrium (LD)‏‎ (9 revisions)
  236. Using Gotcloud on Flux‏‎ (9 revisions)
  237. ContaminationDetection‏‎ (9 revisions)
  238. New Fugue‏‎ (9 revisions)
  239. BamUtil: splitBam‏‎ (9 revisions)
  240. FamRvTest command‏‎ (9 revisions)
  241. Summary Statistics Files Specification for RAREMETAL and rvtests‏‎ (9 revisions)
  242. Biostatistics 501: Main Page‏‎ (8 revisions)
  243. METAL FAQ‏‎ (8 revisions)
  244. Gzip‏‎ (8 revisions)
  245. Biostatistics 666: Modeling Recombination and Migration in the Coalescent‏‎ (8 revisions)
  246. Sayantan Das‏‎ (8 revisions)
  247. Idriver‏‎ (8 revisions)
  248. Examples of Read Mapping with Karma and BWA‏‎ (8 revisions)
  249. BaseQualityCheck‏‎ (8 revisions)
  250. Minimac3 Cookbook : Converting Files to VCF‏‎ (8 revisions)
  251. Debuggers‏‎ (8 revisions)
  252. Bayesdenovo‏‎ (8 revisions)
  253. Biostatistics 666: Introductory Lecture‏‎ (8 revisions)
  254. Biostatistics 666: Hardy-Weinberg Equilibrium‏‎ (7 revisions)
  255. Better X Sessions from Home (NX)‏‎ (7 revisions)
  256. GotCloud: Configuration‏‎ (7 revisions)
  257. SeqShop: Aligning Your Own Genome, May 2015‏‎ (7 revisions)
  258. Jennifer Bragg-Gresham‏‎ (7 revisions)
  259. RAREMETALWORKER X‏‎ (7 revisions)
  260. Mount S3 Volume‏‎ (7 revisions)
  261. SplitPed‏‎ (7 revisions)
  262. BamUtil: dumpAsp‏‎ (7 revisions)
  263. SeqShop: Association Analysis, May 2015‏‎ (7 revisions)
  264. SAM/BAM Convert Sequence‏‎ (7 revisions)
  265. Minimac4 Documentation‏‎ (7 revisions)
  266. SeqShop: Friday - Practicing what we learned, June 2014‏‎ (7 revisions)
  267. PileupBasedVariantCalling‏‎ (7 revisions)
  268. Understanding vcf-summary output‏‎ (6 revisions)
  269. Computer How-Tos‏‎ (6 revisions)
  270. FastQ Validation Criteria‏‎ (6 revisions)
  271. Genotype Likelihood Based Allele Balance‏‎ (6 revisions)
  272. Biostatistics 666: Advanced Coalescent, Changing Population Size‏‎ (6 revisions)
  273. BAM‏‎ (6 revisions)
  274. Biostatistics 666: Maximum Likelihood Allele Frequency Estimation‏‎ (6 revisions)
  275. Git Cheat Sheet‏‎ (6 revisions)
  276. Minimac3 - Full List of Options‏‎ (6 revisions)
  277. GotCloud: RedHat Package‏‎ (6 revisions)
  278. GotCloud: Filters‏‎ (6 revisions)
  279. Scott Vrieze‏‎ (6 revisions)
  280. BamUtil: squeeze‏‎ (6 revisions)
  281. SeqShop: Estimates of Genetic Ancestry Practical, May 2015‏‎ (6 revisions)
  282. Garlic‏‎ (6 revisions)
  283. Tutorial: EMMAX GotCloud STOM: Lecture 5‏‎ (6 revisions)
  284. SNP Call Set Properties‏‎ (6 revisions)
  285. Minimac3 Cookbook : Pre-Phasing‏‎ (6 revisions)
  286. Genotype Likelihood based Allele Frequency‏‎ (6 revisions)
  287. An example of using libcsg‏‎ (6 revisions)
  288. Code Sample: Generating QQ Plots in R‏‎ (6 revisions)
  289. BamUtil: indelDiscordance‏‎ (6 revisions)
  290. StatgenTools‏‎ (5 revisions)
  291. BamUtil: FAQ‏‎ (5 revisions)
  292. Read Mapping‏‎ (5 revisions)
  293. Biostatistics 666: Haplotype Association Tests‏‎ (5 revisions)
  294. Mapping Quality Scores‏‎ (5 revisions)
  295. Vpeep‏‎ (5 revisions)
  296. Mach2dat: Association with MACH output‏‎ (5 revisions)
  297. Rvtests‏‎ (5 revisions)
  298. BamUtil: gapInfo‏‎ (5 revisions)
  299. PedScript‏‎ (5 revisions)
  300. Installing MinGW & MSYS on Windows‏‎ (5 revisions)
  301. Configure GotCloud‏‎ (5 revisions)
  302. Understanding VerifyBamID output‏‎ (5 revisions)
  303. Fst‏‎ (5 revisions)
  304. NHLBI Informatics Resource‏‎ (5 revisions)
  305. Biostatistics 666: Introduction to De Novo Assembly‏‎ (5 revisions)
  306. Meta Analysis of SNPxEnvironment Interaction‏‎ (5 revisions)
  307. BamUtil: asp‏‎ (5 revisions)
  308. BamPileup‏‎ (5 revisions)
  309. Biostatistics 666: Modeling Variation in the Coalescent‏‎ (5 revisions)
  310. M3VCF Files‏‎ (5 revisions)
  311. BamUtil: splitChromosome‏‎ (4 revisions)
  312. Pileup‏‎ (4 revisions)
  313. TrioCaller:Archive‏‎ (4 revisions)
  314. Biostatistics 666: Linkage Analysis in Sibling Pairs‏‎ (4 revisions)
  315. Savvy C++ Library‏‎ (4 revisions)
  316. Biostatistics 666: Course Introduction and Hardy Weinberg Equilibrium‏‎ (4 revisions)
  317. Minimac Diagnostics‏‎ (4 revisions)
  318. Samtools-hybrid‏‎ (4 revisions)
  319. Ben Lerch‏‎ (4 revisions)
  320. Basic Linux Intro‏‎ (4 revisions)
  321. AWS Resources‏‎ (4 revisions)
  322. Biostatistics 666: Introduction to the E-M Algorithm‏‎ (4 revisions)
  323. BamUtil: dumpHeader‏‎ (4 revisions)
  324. RAREFY FAQ‏‎ (4 revisions)
  325. Biostatistics 666: Haplotype Estimation‏‎ (4 revisions)
  326. SAV Command Line Interface‏‎ (4 revisions)
  327. Tutorial: EMMAX GotCloud STOM: Lecture 6‏‎ (4 revisions)
  328. Variant Call Pipeline‏‎ (4 revisions)
  329. 830 - Haplotyper::SampleHaplotypes()‏‎ (4 revisions)
  330. Genotype Likelihood based Inbreeding Coefficient‏‎ (4 revisions)
  331. BamUtil: revert‏‎ (4 revisions)
  332. StatsTools‏‎ (4 revisions)
  333. 830 - Haplotyper::ScoreLeftConditional()‏‎ (4 revisions)
  334. Links to Sequence Analysis Tools‏‎ (4 revisions)
  335. 830 - MINIMAC::main()‏‎ (4 revisions)
  336. Biostatistics 666: Introduction to the Coalescent‏‎ (4 revisions)
  337. CheckVCF.py‏‎ (4 revisions)
  338. Biostatistics 666: Whole Genome Sequencing‏‎ (4 revisions)
  339. Biostatistics 666: Advanced Coalescent, Computation with the Coalescent‏‎ (4 revisions)
  340. TabAnno‏‎ (4 revisions)
  341. Alan Kwong‏‎ (4 revisions)
  342. C++ Class: Pedigree Example‏‎ (4 revisions)
  343. 830 - Haplotyper::SampleOneHaplotype()‏‎ (4 revisions)
  344. Power Calculations: Quantitative Traits‏‎ (4 revisions)
  345. CigarRoller Proposed Update‏‎ (4 revisions)
  346. Biostatistics 666: Linkage Tests for Pairs of Individuals‏‎ (4 revisions)
  347. Tramp‏‎ (4 revisions)
  348. VerifyIDintensity‏‎ (4 revisions)
  349. GWAS‏‎ (3 revisions)
  350. Kyoto Encyclopedia of Genes and Genomes‏‎ (3 revisions)
  351. Sara Rashkin‏‎ (3 revisions)
  352. Biostatistics 666: Applications of the Lander-Green Algorithm‏‎ (3 revisions)
  353. BamUtil: dumpIndex‏‎ (3 revisions)
  354. 830 - Haplotyper::ImputeGenotypes()‏‎ (3 revisions)
  355. Zlib‏‎ (3 revisions)
  356. 830 - Haplotyper::SummarizeOptions()‏‎ (3 revisions)
  357. BamUtil: dumpRefInfo‏‎ (3 revisions)
  358. Understanding QPLOT output‏‎ (3 revisions)
  359. GBR60vc.conf‏‎ (3 revisions)
  360. 830 - Haplotyper::RandomSetup()‏‎ (3 revisions)
  361. BamUtil: findCigars‏‎ (3 revisions)
  362. CHARGE‏‎ (3 revisions)
  363. Lars Fritsche‏‎ (3 revisions)
  364. Screen Commands‏‎ (3 revisions)
  365. TOPMed Site Visit 2018‏‎ (3 revisions)
  366. Ligate Minimac‏‎ (3 revisions)
  367. Xiaowei Zhan‏‎ (3 revisions)
  368. Rare Variant Analysis and Meta-Analysis‏‎ (3 revisions)
  369. BAM to FASTQ‏‎ (3 revisions)
  370. MappabilityScores‏‎ (3 revisions)
  371. METAL CUSTOMVARIABLE‏‎ (3 revisions)
  372. Biostatistics 666: Association Tests in Structured Populations‏‎ (3 revisions)
  373. Biostatistics 666: Power of Genomewide Association Studies‏‎ (3 revisions)
  374. FASTA‏‎ (3 revisions)
  375. Code Sample: Generating Manhattan Plots in R‏‎ (3 revisions)
  376. Ann Arbor Travel Basics‏‎ (3 revisions)
  377. 830 - Haplotyper::ImputeGenotypes() (internal)‏‎ (3 revisions)
  378. Biostatistics 666: Variance Component Analyses‏‎ (3 revisions)
  379. TinySimulator‏‎ (3 revisions)
  380. Merlin‏‎ (2 revisions)
  381. METAL ADDFILTER‏‎ (2 revisions)
  382. Biostatistics 666: Genotype Imputation‏‎ (2 revisions)
  383. Biostatistics 666: Multipoint Analysis in Sibling Pairs‏‎ (2 revisions)
  384. Genotype Likelihood based Hardy-Weinberg Test‏‎ (2 revisions)
  385. SplitRef‏‎ (2 revisions)
  386. Biostatistics 666: Relationship Checking‏‎ (2 revisions)
  387. 830 - Haplotyper::SetupPrior()‏‎ (2 revisions)
  388. 830 - Haplotyper::SampleChromosomes()‏‎ (2 revisions)
  389. 830 - MarkovModel::Condition()‏‎ (2 revisions)
  390. Biostatistics 666: Analysis of Copy Number Using Sequence Data‏‎ (2 revisions)
  391. Example‏‎ (2 revisions)
  392. 830 - MaqIndex::CompareToIndex()‏‎ (2 revisions)
  393. Mary Kate Wing‏‎ (2 revisions)
  394. MaCH Options‏‎ (2 revisions)
  395. NHLBI Exome Sequencing Project‏‎ (2 revisions)
  396. Tom Blackwell‏‎ (2 revisions)
  397. Makefile.tool‏‎ (2 revisions)
  398. GotCloud: Reference Files‏‎ (2 revisions)
  399. SAM: Filtering Reads‏‎ (2 revisions)
  400. StringMap.h‏‎ (2 revisions)
  401. Biostatistics 666: Rare Variant Burden Tests‏‎ (2 revisions)
  402. MaCH: Pedigree with Integer Allele Codes‏‎ (2 revisions)
  403. Gene Ontology‏‎ (2 revisions)
  404. Goncalo Abecasis: Interview with Christiana Fogg‏‎ (2 revisions)
  405. Mantra.cpp‏‎ (2 revisions)
  406. 830 - MarkovModel::Transpose()‏‎ (2 revisions)
  407. 830 - Haplotyper::ScoreLeftConditional() (smart, complicated)‏‎ (2 revisions)
  408. LiftRsNumber.py‏‎ (2 revisions)
  409. RareSimu‏‎ (2 revisions)
  410. GlfMerge‏‎ (2 revisions)
  411. LiftMap.py‏‎ (2 revisions)
  412. 830 - MarkovModel::WalkLeft()‏‎ (2 revisions)
  413. Biostatistics 666: Contemporary Human Genetics‏‎ (2 revisions)
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